Perkins DN - Search Results

1

Integrated multi-level quality control for proteomic profiling studies using mass spectrometry.

Cairns DA, Perkins DN, Stanley AJ, Thompson D, Barrett JH, Selby PJ, Banks RE. Cairns DA, et al. Among authors: perkins dn. BMC Bioinformatics. 2008 Dec 4;9:519. doi: 10.1186/1471-2105-9-519. BMC Bioinformatics. 2008. PMID: 19055809 Free PMC article.

2

Proteomic profiling using mass spectrometry--does normalising by total ion current potentially mask some biological differences?

Cairns DA, Thompson D, Perkins DN, Stanley AJ, Selby PJ, Banks RE. Cairns DA, et al. Among authors: perkins dn. Proteomics. 2008 Jan;8(1):21-7. doi: 10.1002/pmic.200700598. Proteomics. 2008. PMID: 18095358

3

Changes in the urinary proteome post-operatively in renal cancer patients - a reflection of tumour or kidney removal?

Sim SH, Cairns DA, Perkins DN, Peng J, Stanley AJ, Thompson D, Lewington A, Selby PJ, Banks RE. Sim SH, et al. Among authors: perkins dn. Proteomics Clin Appl. 2009 Sep;3(9):1112-22. doi: 10.1002/prca.200900015. Proteomics Clin Appl. 2009. PMID: 21137010

4

Shotgun proteomics of human bile in hilar cholangiocarcinoma.

Farid SG, Craven RA, Peng J, Bonney GK, Perkins DN, Selby PJ, Rajendra Prasad K, Banks RE. Farid SG, et al. Among authors: perkins dn. Proteomics. 2011 May;11(10):2134-8. doi: 10.1002/pmic.201000653. Epub 2011 Apr 18. Proteomics. 2011. PMID: 21500345

5

Probability-based protein identification by searching sequence databases using mass spectrometry data.

Perkins DN, Pappin DJ, Creasy DM, Cottrell JS. Perkins DN, et al. Electrophoresis. 1999 Dec;20(18):3551-67. doi: 10.1002/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0.CO;2-2. Electrophoresis. 1999. PMID: 10612281

6

XFINGER: a tool for searching and visualising protein fingerprints and patterns.

Perkins DN, Attwood TK. Perkins DN, et al. Comput Appl Biosci. 1996 Apr;12(2):89-94. doi: 10.1093/bioinformatics/12.2.89. Comput Appl Biosci. 1996. PMID: 8744771

7

Using statistical models to identify factors that have a role in defining the abundance of ions produced by tandem MS.

Barton SJ, Richardson S, Perkins DN, Bellahn I, Bryant TN, Whittaker JC. Barton SJ, et al. Among authors: perkins dn. Anal Chem. 2007 Aug 1;79(15):5601-7. doi: 10.1021/ac0700272. Epub 2007 Jun 20. Anal Chem. 2007. PMID: 17579495

8

SERPENT--an information storage and analysis resource for protein sequences.

Akrigg D, Attwood TK, Bleasby AJ, Findlay JB, North AC, Maughan NA, Parry-Smith DJ, Perkins DN, Wootton JC. Akrigg D, et al. Among authors: perkins dn. Comput Appl Biosci. 1992 Jun;8(3):295-6. doi: 10.1093/bioinformatics/8.3.295. Comput Appl Biosci. 1992. PMID: 1633573 No abstract available.

9

PROMISE: a database of information on prosthetic centres and metal ions in protein active sites.

Degtyarenko KN, North AC, Perkins DN, Findlay JB. Degtyarenko KN, et al. Among authors: perkins dn. Nucleic Acids Res. 1998 Jan 1;26(1):376-81. doi: 10.1093/nar/26.1.376. Nucleic Acids Res. 1998. PMID: 9399878 Free PMC article.

10

VISTAS: a package for VIsualizing STructures and sequences of proteins.

Perkins DN, Attwood TK. Perkins DN, et al. J Mol Graph. 1995 Feb;13(1):73-5, 62. doi: 10.1016/0263-7855(94)00013-i. J Mol Graph. 1995. PMID: 7794837

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