Pinilla C - Search Results

1

Derivation of an amino acid similarity matrix for peptide: MHC binding and its application as a Bayesian prior.

Kim Y, Sidney J, Pinilla C, Sette A, Peters B. Kim Y, et al. Among authors: pinilla c. BMC Bioinformatics. 2009 Nov 30;10:394. doi: 10.1186/1471-2105-10-394. BMC Bioinformatics. 2009. PMID: 19948066 Free PMC article.

2

Quantitative peptide binding motifs for 19 human and mouse MHC class I molecules derived using positional scanning combinatorial peptide libraries.

Sidney J, Assarsson E, Moore C, Ngo S, Pinilla C, Sette A, Peters B. Sidney J, et al. Among authors: pinilla c. Immunome Res. 2008 Jan 25;4:2. doi: 10.1186/1745-7580-4-2. Immunome Res. 2008. PMID: 18221540 Free PMC article.

3

The most common Chinese rhesus macaque MHC class I molecule shares peptide binding repertoire with the HLA-B7 supertype.

Solomon C, Southwood S, Hoof I, Rudersdorf R, Peters B, Sidney J, Pinilla C, Marcondes MC, Ling B, Marx P, Sette A, Mothé BR. Solomon C, et al. Among authors: pinilla c. Immunogenetics. 2010 Jul;62(7):451-64. doi: 10.1007/s00251-010-0450-3. Epub 2010 May 18. Immunogenetics. 2010. PMID: 20480161 Free PMC article.

4

Measurement of MHC/peptide interactions by gel filtration or monoclonal antibody capture.

Sidney J, Southwood S, Moore C, Oseroff C, Pinilla C, Grey HM, Sette A. Sidney J, et al. Among authors: pinilla c. Curr Protoc Immunol. 2013 Feb;Chapter 18:Unit 18.3.. doi: 10.1002/0471142735.im1803s100. Curr Protoc Immunol. 2013. PMID: 23392640 Free PMC article.

5

Characterization of the peptide-binding specificity of the chimpanzee class I alleles A 0301 and A 0401 using a combinatorial peptide library.

Sidney J, Peters B, Moore C, Pencille TJ, Ngo S, Masterman KA, Asabe S, Pinilla C, Chisari FV, Sette A. Sidney J, et al. Among authors: pinilla c. Immunogenetics. 2007 Sep;59(9):745-51. doi: 10.1007/s00251-007-0243-5. Epub 2007 Aug 16. Immunogenetics. 2007. PMID: 17701407

6

Towards a consensus on datasets and evaluation metrics for developing B-cell epitope prediction tools.

Greenbaum JA, Andersen PH, Blythe M, Bui HH, Cachau RE, Crowe J, Davies M, Kolaskar AS, Lund O, Morrison S, Mumey B, Ofran Y, Pellequer JL, Pinilla C, Ponomarenko JV, Raghava GP, van Regenmortel MH, Roggen EL, Sette A, Schlessinger A, Sollner J, Zand M, Peters B. Greenbaum JA, et al. Among authors: pinilla c. J Mol Recognit. 2007 Mar-Apr;20(2):75-82. doi: 10.1002/jmr.815. J Mol Recognit. 2007. PMID: 17205610 Review.

7

Discovery and characterization of highly immunogenic and broadly recognized mimics of the HIV-1 CTL epitope Gag77-85.

Boggiano C, Moya R, Pinilla C, Bihl F, Brander C, Sidney J, Sette A, Blondelle SE. Boggiano C, et al. Among authors: pinilla c. Eur J Immunol. 2005 May;35(5):1428-37. doi: 10.1002/eji.200425903. Eur J Immunol. 2005. PMID: 15789356 Free article.

8

Application of support vector machines for T-cell epitopes prediction.

Zhao Y, Pinilla C, Valmori D, Martin R, Simon R. Zhao Y, et al. Among authors: pinilla c. Bioinformatics. 2003 Oct 12;19(15):1978-84. doi: 10.1093/bioinformatics/btg255. Bioinformatics. 2003. PMID: 14555632

9

How the T cell repertoire becomes peptide and MHC specific.

Huseby ES, White J, Crawford F, Vass T, Becker D, Pinilla C, Marrack P, Kappler JW. Huseby ES, et al. Among authors: pinilla c. Cell. 2005 Jul 29;122(2):247-60. doi: 10.1016/j.cell.2005.05.013. Cell. 2005. PMID: 16051149 Free article.

10

Crystal structure of a peptide complex of anti-influenza peptide antibody Fab 26/9. Comparison of two different antibodies bound to the same peptide antigen.

Churchill ME, Stura EA, Pinilla C, Appel JR, Houghten RA, Kono DH, Balderas RS, Fieser GG, Schulze-Gahmen U, Wilson IA. Churchill ME, et al. Among authors: pinilla c. J Mol Biol. 1994 Aug 26;241(4):534-56. doi: 10.1006/jmbi.1994.1530. J Mol Biol. 1994. PMID: 7520084

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