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Dynamics of Individual T Cell Repertoires: From Cord Blood to Centenarians.
Britanova OV, Shugay M, Merzlyak EM, Staroverov DB, Putintseva EV, Turchaninova MA, Mamedov IZ, Pogorelyy MV, Bolotin DA, Izraelson M, Davydov AN, Egorov ES, Kasatskaya SA, Rebrikov DV, Lukyanov S, Chudakov DM. Britanova OV, et al. Among authors: pogorelyy mv. J Immunol. 2016 Jun 15;196(12):5005-13. doi: 10.4049/jimmunol.1600005. Epub 2016 May 13. J Immunol. 2016. PMID: 27183615
Mother and child T cell receptor repertoires: deep profiling study.
Putintseva EV, Britanova OV, Staroverov DB, Merzlyak EM, Turchaninova MA, Shugay M, Bolotin DA, Pogorelyy MV, Mamedov IZ, Bobrynina V, Maschan M, Lebedev YB, Chudakov DM. Putintseva EV, et al. Among authors: pogorelyy mv. Front Immunol. 2013 Dec 25;4:463. doi: 10.3389/fimmu.2013.00463. eCollection 2013. Front Immunol. 2013. PMID: 24400004 Free PMC article.
Huge Overlap of Individual TCR Beta Repertoires.
Shugay M, Bolotin DA, Putintseva EV, Pogorelyy MV, Mamedov IZ, Chudakov DM. Shugay M, et al. Among authors: pogorelyy mv. Front Immunol. 2013 Dec 25;4:466. doi: 10.3389/fimmu.2013.00466. eCollection 2013. Front Immunol. 2013. PMID: 24400005 Free PMC article. No abstract available.
VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires.
Shugay M, Bagaev DV, Turchaninova MA, Bolotin DA, Britanova OV, Putintseva EV, Pogorelyy MV, Nazarov VI, Zvyagin IV, Kirgizova VI, Kirgizov KI, Skorobogatova EV, Chudakov DM. Shugay M, et al. Among authors: pogorelyy mv. PLoS Comput Biol. 2015 Nov 25;11(11):e1004503. doi: 10.1371/journal.pcbi.1004503. eCollection 2015 Nov. PLoS Comput Biol. 2015. PMID: 26606115 Free PMC article.
Distinctive properties of identical twins' TCR repertoires revealed by high-throughput sequencing.
Zvyagin IV, Pogorelyy MV, Ivanova ME, Komech EA, Shugay M, Bolotin DA, Shelenkov AA, Kurnosov AA, Staroverov DB, Chudakov DM, Lebedev YB, Mamedov IZ. Zvyagin IV, et al. Among authors: pogorelyy mv. Proc Natl Acad Sci U S A. 2014 Apr 22;111(16):5980-5. doi: 10.1073/pnas.1319389111. Epub 2014 Apr 7. Proc Natl Acad Sci U S A. 2014. PMID: 24711416 Free PMC article.
tcR: an R package for T cell receptor repertoire advanced data analysis.
Nazarov VI, Pogorelyy MV, Komech EA, Zvyagin IV, Bolotin DA, Shugay M, Chudakov DM, Lebedev YB, Mamedov IZ. Nazarov VI, et al. Among authors: pogorelyy mv. BMC Bioinformatics. 2015 May 28;16(1):175. doi: 10.1186/s12859-015-0613-1. BMC Bioinformatics. 2015. PMID: 26017500 Free PMC article.
45 results