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MEDFORD: A human- and machine-readable metadata markup language.
Database (Oxford). 2022 Aug 17;2022:baac065. doi: 10.1093/database/baac065.
Database (Oxford). 2022.
PMID: 35976727
Free PMC article.
MUNDO: protein function prediction embedded in a multispecies world.
Arsenescu V, Devkota K, Erden M, Shpilker P, Werenski M, Cowen LJ.
Arsenescu V, et al. Among authors: shpilker p.
Bioinform Adv. 2021 Sep 29;2(1):vbab025. doi: 10.1093/bioadv/vbab025. eCollection 2022.
Bioinform Adv. 2021.
PMID: 36699351
Free PMC article.
Item in Clipboard
Characterizing transcriptomic responses to sediment stress across location and morphology in reef-building corals.
Ashey J, McKelvie H, Freeman J, Shpilker P, Zane LH, Becker DM, Cowen L, Richmond RH, Paul VJ, Seneca FO, Putnam HM.
Ashey J, et al. Among authors: shpilker p.
PeerJ. 2024 Jan 30;12:e16654. doi: 10.7717/peerj.16654. eCollection 2024.
PeerJ. 2024.
PMID: 38313033
Free PMC article.
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Long-adapter single-strand oligonucleotide probes for the massively multiplexed cloning of kilobase genome regions.
Tosi L, Sridhara V, Yang Y, Guan D, Shpilker P, Segata N, Larman HB, Parekkadan B.
Tosi L, et al. Among authors: shpilker p.
Nat Biomed Eng. 2017;1:0092. doi: 10.1038/s41551-017-0092. Epub 2017 Jun 26.
Nat Biomed Eng. 2017.
PMID: 29152409
Free PMC article.
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Analyzing histone ChIP-seq data with a bin-based probability of being signal.
Hecht V, Dong K, Rajesh S, Shpilker P, Wekhande S, Shoresh N.
Hecht V, et al. Among authors: shpilker p.
PLoS Comput Biol. 2023 Oct 20;19(10):e1011568. doi: 10.1371/journal.pcbi.1011568. eCollection 2023 Oct.
PLoS Comput Biol. 2023.
PMID: 37862349
Free PMC article.
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Cell shape, and not 2D migration, predicts extracellular matrix-driven 3D cell invasion in breast cancer.
Baskaran JP, Weldy A, Guarin J, Munoz G, Shpilker PH, Kotlik M, Subbiah N, Wishart A, Peng Y, Miller MA, Cowen L, Oudin MJ.
Baskaran JP, et al. Among authors: shpilker ph.
APL Bioeng. 2020 May 5;4(2):026105. doi: 10.1063/1.5143779. eCollection 2020 Jun.
APL Bioeng. 2020.
PMID: 32455252
Free PMC article.
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