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The genomic landscape of Neanderthal ancestry in present-day humans.
Sankararaman S, Mallick S, Dannemann M, Prüfer K, Kelso J, Pääbo S, Patterson N, Reich D. Sankararaman S, et al. Among authors: prufer k. Nature. 2014 Mar 20;507(7492):354-7. doi: 10.1038/nature12961. Epub 2014 Jan 29. Nature. 2014. PMID: 24476815 Free PMC article.
Why do human diversity levels vary at a megabase scale?
Hellmann I, Prüfer K, Ji H, Zody MC, Pääbo S, Ptak SE. Hellmann I, et al. Among authors: prufer k. Genome Res. 2005 Sep;15(9):1222-31. doi: 10.1101/gr.3461105. Genome Res. 2005. PMID: 16140990 Free PMC article.
Patterns of damage in genomic DNA sequences from a Neandertal.
Briggs AW, Stenzel U, Johnson PL, Green RE, Kelso J, Prüfer K, Meyer M, Krause J, Ronan MT, Lachmann M, Pääbo S. Briggs AW, et al. Among authors: prufer k. Proc Natl Acad Sci U S A. 2007 Sep 11;104(37):14616-21. doi: 10.1073/pnas.0704665104. Epub 2007 Aug 21. Proc Natl Acad Sci U S A. 2007. PMID: 17715061 Free PMC article.
Neanderthals in central Asia and Siberia.
Krause J, Orlando L, Serre D, Viola B, Prüfer K, Richards MP, Hublin JJ, Hänni C, Derevianko AP, Pääbo S. Krause J, et al. Among authors: prufer k. Nature. 2007 Oct 18;449(7164):902-4. doi: 10.1038/nature06193. Epub 2007 Sep 30. Nature. 2007. PMID: 17914357
PatMaN: rapid alignment of short sequences to large databases.
Prüfer K, Stenzel U, Dannemann M, Green RE, Lachmann M, Kelso J. Prüfer K, et al. Bioinformatics. 2008 Jul 1;24(13):1530-1. doi: 10.1093/bioinformatics/btn223. Epub 2008 May 8. Bioinformatics. 2008. PMID: 18467344 Free PMC article.
A complete Neandertal mitochondrial genome sequence determined by high-throughput sequencing.
Green RE, Malaspinas AS, Krause J, Briggs AW, Johnson PL, Uhler C, Meyer M, Good JM, Maricic T, Stenzel U, Prüfer K, Siebauer M, Burbano HA, Ronan M, Rothberg JM, Egholm M, Rudan P, Brajković D, Kućan Z, Gusić I, Wikström M, Laakkonen L, Kelso J, Slatkin M, Pääbo S. Green RE, et al. Among authors: prufer k. Cell. 2008 Aug 8;134(3):416-26. doi: 10.1016/j.cell.2008.06.021. Cell. 2008. PMID: 18692465 Free PMC article.
The Neandertal genome and ancient DNA authenticity.
Green RE, Briggs AW, Krause J, Prüfer K, Burbano HA, Siebauer M, Lachmann M, Pääbo S. Green RE, et al. Among authors: prufer k. EMBO J. 2009 Sep 2;28(17):2494-502. doi: 10.1038/emboj.2009.222. Epub 2009 Aug 6. EMBO J. 2009. PMID: 19661919 Free PMC article. Review.
Computational challenges in the analysis of ancient DNA.
Prüfer K, Stenzel U, Hofreiter M, Pääbo S, Kelso J, Green RE. Prüfer K, et al. Genome Biol. 2010;11(5):R47. doi: 10.1186/gb-2010-11-5-r47. Epub 2010 May 6. Genome Biol. 2010. PMID: 20441577 Free PMC article.
A draft sequence of the Neandertal genome.
Green RE, Krause J, Briggs AW, Maricic T, Stenzel U, Kircher M, Patterson N, Li H, Zhai W, Fritz MH, Hansen NF, Durand EY, Malaspinas AS, Jensen JD, Marques-Bonet T, Alkan C, Prüfer K, Meyer M, Burbano HA, Good JM, Schultz R, Aximu-Petri A, Butthof A, Höber B, Höffner B, Siegemund M, Weihmann A, Nusbaum C, Lander ES, Russ C, Novod N, Affourtit J, Egholm M, Verna C, Rudan P, Brajkovic D, Kucan Ž, Gušic I, Doronichev VB, Golovanova LV, Lalueza-Fox C, de la Rasilla M, Fortea J, Rosas A, Schmitz RW, Johnson PLF, Eichler EE, Falush D, Birney E, Mullikin JC, Slatkin M, Nielsen R, Kelso J, Lachmann M, Reich D, Pääbo S. Green RE, et al. Among authors: prufer k. Science. 2010 May 7;328(5979):710-722. doi: 10.1126/science.1188021. Science. 2010. PMID: 20448178 Free PMC article.
103 results