Quince C - Search Results

1

Insight into biases and sequencing errors for amplicon sequencing with the Illumina MiSeq platform.

Schirmer M, Ijaz UZ, D'Amore R, Hall N, Sloan WT, Quince C. Schirmer M, et al. Among authors: quince c. Nucleic Acids Res. 2015 Mar 31;43(6):e37. doi: 10.1093/nar/gku1341. Epub 2015 Jan 13. Nucleic Acids Res. 2015. PMID: 25586220 Free PMC article.

2

A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling.

D'Amore R, Ijaz UZ, Schirmer M, Kenny JG, Gregory R, Darby AC, Shakya M, Podar M, Quince C, Hall N. D'Amore R, et al. Among authors: quince c. BMC Genomics. 2016 Jan 14;17:55. doi: 10.1186/s12864-015-2194-9. BMC Genomics. 2016. PMID: 26763898 Free PMC article.

3

Illumina error profiles: resolving fine-scale variation in metagenomic sequencing data.

Schirmer M, D'Amore R, Ijaz UZ, Hall N, Quince C. Schirmer M, et al. Among authors: quince c. BMC Bioinformatics. 2016 Mar 11;17:125. doi: 10.1186/s12859-016-0976-y. BMC Bioinformatics. 2016. PMID: 26968756 Free PMC article.

4

The rational exploration of microbial diversity.

Quince C, Curtis TP, Sloan WT. Quince C, et al. ISME J. 2008 Oct;2(10):997-1006. doi: 10.1038/ismej.2008.69. Epub 2008 Jul 24. ISME J. 2008. PMID: 18650928 Free article.

5

Accurate determination of microbial diversity from 454 pyrosequencing data.

Quince C, Lanzén A, Curtis TP, Davenport RJ, Hall N, Head IM, Read LF, Sloan WT. Quince C, et al. Nat Methods. 2009 Sep;6(9):639-41. doi: 10.1038/nmeth.1361. Epub 2009 Aug 9. Nat Methods. 2009. PMID: 19668203

6

Benchmarking of viral haplotype reconstruction programmes: an overview of the capacities and limitations of currently available programmes.

Schirmer M, Sloan WT, Quince C. Schirmer M, et al. Among authors: quince c. Brief Bioinform. 2014 May;15(3):431-42. doi: 10.1093/bib/bbs081. Epub 2012 Dec 19. Brief Bioinform. 2014. PMID: 23257116 Review.

7

Binning metagenomic contigs by coverage and composition.

Alneberg J, Bjarnason BS, de Bruijn I, Schirmer M, Quick J, Ijaz UZ, Lahti L, Loman NJ, Andersson AF, Quince C. Alneberg J, et al. Among authors: quince c. Nat Methods. 2014 Nov;11(11):1144-6. doi: 10.1038/nmeth.3103. Epub 2014 Sep 14. Nat Methods. 2014. PMID: 25218180

8

The effect of DNA extraction methodology on gut microbiota research applications.

Gerasimidis K, Bertz M, Quince C, Brunner K, Bruce A, Combet E, Calus S, Loman N, Ijaz UZ. Gerasimidis K, et al. Among authors: quince c. BMC Res Notes. 2016 Jul 26;9:365. doi: 10.1186/s13104-016-2171-7. BMC Res Notes. 2016. PMID: 27456340 Free PMC article.

9

Stable-isotope probing and metagenomics reveal predation by protozoa drives E. coli removal in slow sand filters.

Haig SJ, Schirmer M, D'Amore R, Gibbs J, Davies RL, Collins G, Quince C. Haig SJ, et al. Among authors: quince c. ISME J. 2015 Mar 17;9(4):797-808. doi: 10.1038/ismej.2014.175. ISME J. 2015. PMID: 25279786 Free PMC article.

10

Response to Kaakoush et al.

Gerasimidis K, Ijaz UZ, Edwards C, Russell RK, Quince C, Hansen R. Gerasimidis K, et al. Among authors: quince c. Am J Gastroenterol. 2016 Jul;111(7):1033-4. doi: 10.1038/ajg.2016.169. Am J Gastroenterol. 2016. PMID: 27356826 No abstract available.

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