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Global linking of cell tracks using the Viterbi algorithm.
Magnusson KE, Jalden J, Gilbert PM, Blau HM. Magnusson KE, et al. IEEE Trans Med Imaging. 2015 Apr;34(4):911-29. doi: 10.1109/TMI.2014.2370951. Epub 2014 Nov 14. IEEE Trans Med Imaging. 2015. PMID: 25415983 Free PMC article.
A benchmark for comparison of cell tracking algorithms.
Maška M, Ulman V, Svoboda D, Matula P, Matula P, Ederra C, Urbiola A, España T, Venkatesan S, Balak DM, Karas P, Bolcková T, Streitová M, Carthel C, Coraluppi S, Harder N, Rohr K, Magnusson KE, Jaldén J, Blau HM, Dzyubachyk O, Křížek P, Hagen GM, Pastor-Escuredo D, Jimenez-Carretero D, Ledesma-Carbayo MJ, Muñoz-Barrutia A, Meijering E, Kozubek M, Ortiz-de-Solorzano C. Maška M, et al. Bioinformatics. 2014 Jun 1;30(11):1609-17. doi: 10.1093/bioinformatics/btu080. Epub 2014 Feb 12. Bioinformatics. 2014. PMID: 24526711 Free PMC article.
Objective comparison of particle tracking methods.
Chenouard N, Smal I, de Chaumont F, Maška M, Sbalzarini IF, Gong Y, Cardinale J, Carthel C, Coraluppi S, Winter M, Cohen AR, Godinez WJ, Rohr K, Kalaidzidis Y, Liang L, Duncan J, Shen H, Xu Y, Magnusson KE, Jaldén J, Blau HM, Paul-Gilloteaux P, Roudot P, Kervrann C, Waharte F, Tinevez JY, Shorte SL, Willemse J, Celler K, van Wezel GP, Dan HW, Tsai YS, Ortiz de Solórzano C, Olivo-Marin JC, Meijering E. Chenouard N, et al. Nat Methods. 2014 Mar;11(3):281-9. doi: 10.1038/nmeth.2808. Epub 2014 Jan 19. Nat Methods. 2014. PMID: 24441936 Free PMC article.
21 results