Rantanen VV - Search Results

1

Molecular evolution of adrenoceptors and dopamine receptors: implications for the binding of catecholamines.

Xhaard H, Rantanen VV, Nyrönen T, Johnson MS. Xhaard H, et al. Among authors: rantanen vv. J Med Chem. 2006 Mar 9;49(5):1706-19. doi: 10.1021/jm0511031. J Med Chem. 2006. PMID: 16509586

2

Conserved structural, pharmacological and functional properties among the three human and five zebrafish alpha 2-adrenoceptors.

Ruuskanen JO, Laurila J, Xhaard H, Rantanen VV, Vuoriluoto K, Wurster S, Marjamäki A, Vainio M, Johnson MS, Scheinin M. Ruuskanen JO, et al. Among authors: rantanen vv. Br J Pharmacol. 2005 Jan;144(2):165-77. doi: 10.1038/sj.bjp.0706057. Br J Pharmacol. 2005. PMID: 15655522 Free PMC article.

3

Model structures of alpha-2 adrenoceptors in complex with automatically docked antagonist ligands raise the possibility of interactions dissimilar from agonist ligands.

Xhaard H, Nyrönen T, Rantanen VV, Ruuskanen JO, Laurila J, Salminen T, Scheinin M, Johnson MS. Xhaard H, et al. Among authors: rantanen vv. J Struct Biol. 2005 May;150(2):126-43. doi: 10.1016/j.jsb.2004.12.008. J Struct Biol. 2005. PMID: 15866736

4

A priori contact preferences in molecular recognition.

Rantanen VV, Gyllenberg M, Koski T, Johnson MS. Rantanen VV, et al. J Bioinform Comput Biol. 2005 Aug;3(4):861-90. doi: 10.1142/s0219720005001417. J Bioinform Comput Biol. 2005. PMID: 16078365

5

A dissimilarity matrix between protein atom classes based on Gaussian mixtures.

Rantanen VV, Gyllenberg M, Koski T, Johnson MS. Rantanen VV, et al. Bioinformatics. 2002 Sep;18(9):1257-63. doi: 10.1093/bioinformatics/18.9.1257. Bioinformatics. 2002. PMID: 12217918

6

A Bayesian molecular interaction library.

Rantanen VV, Gyllenberg M, Koski T, Johnson MS. Rantanen VV, et al. J Comput Aided Mol Des. 2003 Jul;17(7):435-61. doi: 10.1023/a:1027371810547. J Comput Aided Mol Des. 2003. PMID: 14677639

7

BODIL: a molecular modeling environment for structure-function analysis and drug design.

Lehtonen JV, Still DJ, Rantanen VV, Ekholm J, Björklund D, Iftikhar Z, Huhtala M, Repo S, Jussila A, Jaakkola J, Pentikäinen O, Nyrönen T, Salminen T, Gyllenberg M, Johnson MS. Lehtonen JV, et al. Among authors: rantanen vv. J Comput Aided Mol Des. 2004 Jun;18(6):401-19. doi: 10.1007/s10822-004-3752-4. J Comput Aided Mol Des. 2004. PMID: 15663001

8

A fragment library based on Gaussian mixtures predicting favorable molecular interactions.

Rantanen VV, Denessiouk KA, Gyllenberg M, Koski T, Johnson MS. Rantanen VV, et al. J Mol Biol. 2001 Oct 12;313(1):197-214. doi: 10.1006/jmbi.2001.5023. J Mol Biol. 2001. PMID: 11601856

9

Adenine recognition: a motif present in ATP-, CoA-, NAD-, NADP-, and FAD-dependent proteins.

Denessiouk KA, Rantanen VV, Johnson MS. Denessiouk KA, et al. Among authors: rantanen vv. Proteins. 2001 Aug 15;44(3):282-91. doi: 10.1002/prot.1093. Proteins. 2001. PMID: 11455601

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