Rokka A - Search Results

1

The L1TD1 protein interactome reveals the importance of post-transcriptional regulation in human pluripotency.

Emani MR, Närvä E, Stubb A, Chakroborty D, Viitala M, Rokka A, Rahkonen N, Moulder R, Denessiouk K, Trokovic R, Lund R, Elo LL, Lahesmaa R. Emani MR, et al. Among authors: rokka a. Stem Cell Reports. 2015 Mar 10;4(3):519-28. doi: 10.1016/j.stemcr.2015.01.014. Epub 2015 Feb 19. Stem Cell Reports. 2015. PMID: 25702638 Free PMC article.

2

Optimization of Statistical Methods Impact on Quantitative Proteomics Data.

Pursiheimo A, Vehmas AP, Afzal S, Suomi T, Chand T, Strauss L, Poutanen M, Rokka A, Corthals GL, Elo LL. Pursiheimo A, et al. Among authors: rokka a. J Proteome Res. 2015 Oct 2;14(10):4118-26. doi: 10.1021/acs.jproteome.5b00183. Epub 2015 Sep 8. J Proteome Res. 2015. PMID: 26321463

3

Brief Isoflurane Anesthesia Produces Prominent Phosphoproteomic Changes in the Adult Mouse Hippocampus.

Kohtala S, Theilmann W, Suomi T, Wigren HK, Porkka-Heiskanen T, Elo LL, Rokka A, Rantamäki T. Kohtala S, et al. Among authors: rokka a. ACS Chem Neurosci. 2016 Jun 15;7(6):749-56. doi: 10.1021/acschemneuro.6b00002. Epub 2016 Apr 28. ACS Chem Neurosci. 2016. PMID: 27074656

4

Quantitative proteomic characterization and comparison of T helper 17 and induced regulatory T cells.

Mohammad I, Nousiainen K, Bhosale SD, Starskaia I, Moulder R, Rokka A, Cheng F, Mohanasundaram P, Eriksson JE, Goodlett DR, Lähdesmäki H, Chen Z. Mohammad I, et al. Among authors: rokka a. PLoS Biol. 2018 May 31;16(5):e2004194. doi: 10.1371/journal.pbio.2004194. eCollection 2018 May. PLoS Biol. 2018. PMID: 29851958 Free PMC article.

5

Data-Independent Acquisition Mass Spectrometry in Metaproteomics of Gut Microbiota-Implementation and Computational Analysis.

Aakko J, Pietilä S, Suomi T, Mahmoudian M, Toivonen R, Kouvonen P, Rokka A, Hänninen A, Elo LL. Aakko J, et al. Among authors: rokka a. J Proteome Res. 2020 Jan 3;19(1):432-436. doi: 10.1021/acs.jproteome.9b00606. Epub 2019 Dec 4. J Proteome Res. 2020. PMID: 31755272

6

A carbohydrate-active enzyme (CAZy) profile links successful metabolic specialization of Prevotella to its abundance in gut microbiota.

Aakko J, Pietilä S, Toivonen R, Rokka A, Mokkala K, Laitinen K, Elo L, Hänninen A. Aakko J, et al. Among authors: rokka a. Sci Rep. 2020 Jul 24;10(1):12411. doi: 10.1038/s41598-020-69241-2. Sci Rep. 2020. PMID: 32709972 Free PMC article.

7

GGA2 and RAB13 promote activity-dependent β1-integrin recycling.

Sahgal P, Alanko J, Icha J, Paatero I, Hamidi H, Arjonen A, Pietilä M, Rokka A, Ivaska J. Sahgal P, et al. Among authors: rokka a. J Cell Sci. 2019 Jun 7;132(11):jcs233387. doi: 10.1242/jcs.233387. J Cell Sci. 2019. PMID: 31076515

8

Relevance Rank Platform (RRP) for Functional Filtering of High Content Protein-Protein Interaction Data.

Pokharel YR, Saarela J, Szwajda A, Rupp C, Rokka A, Lal Kumar Karna S, Teittinen K, Corthals G, Kallioniemi O, Wennerberg K, Aittokallio T, Westermarck J. Pokharel YR, et al. Among authors: rokka a. Mol Cell Proteomics. 2015 Dec;14(12):3274-83. doi: 10.1074/mcp.M115.050773. Epub 2015 Oct 23. Mol Cell Proteomics. 2015. PMID: 26499835 Free PMC article.

9

Orphan G protein-coupled receptor GPRC5A modulates integrin β1-mediated epithelial cell adhesion.

Bulanova DR, Akimov YA, Rokka A, Laajala TD, Aittokallio T, Kouvonen P, Pellinen T, Kuznetsov SG. Bulanova DR, et al. Among authors: rokka a. Cell Adh Migr. 2017 Sep 3;11(5-6):434-446. doi: 10.1080/19336918.2016.1245264. Epub 2017 Feb 6. Cell Adh Migr. 2017. PMID: 27715394 Free PMC article.

10

CRK2 Enhances Salt Tolerance by Regulating Callose Deposition in Connection with PLDα1.

Hunter K, Kimura S, Rokka A, Tran HC, Toyota M, Kukkonen JP, Wrzaczek M. Hunter K, et al. Among authors: rokka a. Plant Physiol. 2019 Aug;180(4):2004-2021. doi: 10.1104/pp.19.00560. Epub 2019 May 22. Plant Physiol. 2019. PMID: 31118265 Free PMC article.

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