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Evolving BioAssay Ontology (BAO): modularization, integration and applications.
Abeyruwan S, Vempati UD, Küçük-McGinty H, Visser U, Koleti A, Mir A, Sakurai K, Chung C, Bittker JA, Clemons PA, Brudz S, Siripala A, Morales AJ, Romacker M, Twomey D, Bureeva S, Lemmon V, Schürer SC. Abeyruwan S, et al. Among authors: romacker m. J Biomed Semantics. 2014 Jun 3;5(Suppl 1 Proceedings of the Bio-Ontologies Spec Interest G):S5. doi: 10.1186/2041-1480-5-S1-S5. eCollection 2014. J Biomed Semantics. 2014. PMID: 25093074 Free PMC article.
Ontology mapping for semantically enabled applications.
Harrow I, Balakrishnan R, Jimenez-Ruiz E, Jupp S, Lomax J, Reed J, Romacker M, Senger C, Splendiani A, Wilson J, Woollard P. Harrow I, et al. Among authors: romacker m. Drug Discov Today. 2019 Oct;24(10):2068-2075. doi: 10.1016/j.drudis.2019.05.020. Epub 2019 May 31. Drug Discov Today. 2019. PMID: 31158512 Free article. Review.
Implementation and relevance of FAIR data principles in biopharmaceutical R&D.
Wise J, de Barron AG, Splendiani A, Balali-Mood B, Vasant D, Little E, Mellino G, Harrow I, Smith I, Taubert J, van Bochove K, Romacker M, Walgemoed P, Jimenez RC, Winnenburg R, Plasterer T, Gupta V, Hedley V. Wise J, et al. Among authors: romacker m. Drug Discov Today. 2019 Apr;24(4):933-938. doi: 10.1016/j.drudis.2019.01.008. Epub 2019 Jan 25. Drug Discov Today. 2019. PMID: 30690198 Free article.
OntoGene in BioCreative II.
Rinaldi F, Kappeler T, Kaljurand K, Schneider G, Klenner M, Clematide S, Hess M, von Allmen JM, Parisot P, Romacker M, Vachon T. Rinaldi F, et al. Among authors: romacker m. Genome Biol. 2008;9 Suppl 2(Suppl 2):S13. doi: 10.1186/gb-2008-9-s2-s13. Epub 2008 Sep 1. Genome Biol. 2008. PMID: 18834491 Free PMC article.
Using the OntoGene pipeline for the triage task of BioCreative 2012.
Rinaldi F, Clematide S, Hafner S, Schneider G, Grigonyte G, Romacker M, Vachon T. Rinaldi F, et al. Among authors: romacker m. Database (Oxford). 2013 Feb 9;2013:bas053. doi: 10.1093/database/bas053. Print 2013. Database (Oxford). 2013. PMID: 23396322 Free PMC article.
The gene normalization task in BioCreative III.
Lu Z, Kao HY, Wei CH, Huang M, Liu J, Kuo CJ, Hsu CN, Tsai RT, Dai HJ, Okazaki N, Cho HC, Gerner M, Solt I, Agarwal S, Liu F, Vishnyakova D, Ruch P, Romacker M, Rinaldi F, Bhattacharya S, Srinivasan P, Liu H, Torii M, Matos S, Campos D, Verspoor K, Livingston KM, Wilbur WJ. Lu Z, et al. Among authors: romacker m. BMC Bioinformatics. 2011 Oct 3;12 Suppl 8(Suppl 8):S2. doi: 10.1186/1471-2105-12-S8-S2. BMC Bioinformatics. 2011. PMID: 22151901 Free PMC article.
28 results