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Studying RNA-DNA interactome by Red-C identifies noncoding RNAs associated with various chromatin types and reveals transcription dynamics.
Nucleic Acids Res. 2020 Jul 9;48(12):6699-6714. doi: 10.1093/nar/gkaa457.
Nucleic Acids Res. 2020.
PMID: 32479626
Free PMC article.
Single-nucleotide-resolution mapping of DNA gyrase cleavage sites across the Escherichia coli genome.
Sutormin D, Rubanova N, Logacheva M, Ghilarov D, Severinov K.
Sutormin D, et al.
Nucleic Acids Res. 2019 Feb 20;47(3):1373-1388. doi: 10.1093/nar/gky1222.
Nucleic Acids Res. 2019.
PMID: 30517674
Free PMC article.
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Single-nucleotide-resolution mapping of DNA gyrase cleavage sites across the Escherichia coli genome.
Sutormin D, Rubanova N, Logacheva M, Ghilarov D, Severinov K.
Sutormin D, et al.
Nucleic Acids Res. 2019 Feb 20;47(3):1601. doi: 10.1093/nar/gky1312.
Nucleic Acids Res. 2019.
PMID: 30624743
Free PMC article.
No abstract available.
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Defining the seed sequence of the Cas12b CRISPR-Cas effector complex.
Jain I, Minakhin L, Mekler V, Sitnik V, Rubanova N, Severinov K, Semenova E.
Jain I, et al.
RNA Biol. 2019 Apr;16(4):413-422. doi: 10.1080/15476286.2018.1495492. Epub 2018 Aug 17.
RNA Biol. 2019.
PMID: 30022698
Free PMC article.
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Centrality and the shortest path approach in the human interactome.
Rubanova N, Morozova N.
Rubanova N, et al.
J Bioinform Comput Biol. 2019 Aug;17(4):1950027. doi: 10.1142/S0219720019500276.
J Bioinform Comput Biol. 2019.
PMID: 31617463
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MasterPATH: network analysis of functional genomics screening data.
Rubanova N, Pinna G, Kropp J, Campalans A, Radicella JP, Polesskaya A, Harel-Bellan A, Morozova N.
Rubanova N, et al.
BMC Genomics. 2020 Sep 14;21(1):632. doi: 10.1186/s12864-020-07047-2.
BMC Genomics. 2020.
PMID: 32928103
Free PMC article.
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