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A provisional regulatory gene network for specification of endomesoderm in the sea urchin embryo.
Davidson EH, Rast JP, Oliveri P, Ransick A, Calestani C, Yuh CH, Minokawa T, Amore G, Hinman V, Arenas-Mena C, Otim O, Brown CT, Livi CB, Lee PY, Revilla R, Schilstra MJ, Clarke PJ, Rust AG, Pan Z, Arnone MI, Rowen L, Cameron RA, McClay DR, Hood L, Bolouri H. Davidson EH, et al. Among authors: rust ag. Dev Biol. 2002 Jun 1;246(1):162-90. doi: 10.1006/dbio.2002.0635. Dev Biol. 2002. PMID: 12027441 Free article.
A genomic regulatory network for development.
Davidson EH, Rast JP, Oliveri P, Ransick A, Calestani C, Yuh CH, Minokawa T, Amore G, Hinman V, Arenas-Mena C, Otim O, Brown CT, Livi CB, Lee PY, Revilla R, Rust AG, Pan Zj, Schilstra MJ, Clarke PJ, Arnone MI, Rowen L, Cameron RA, McClay DR, Hood L, Bolouri H. Davidson EH, et al. Among authors: rust ag. Science. 2002 Mar 1;295(5560):1669-78. doi: 10.1126/science.1069883. Science. 2002. PMID: 11872831 Review.
New computational approaches for analysis of cis-regulatory networks.
Brown CT, Rust AG, Clarke PJ, Pan Z, Schilstra MJ, De Buysscher T, Griffin G, Wold BJ, Cameron RA, Davidson EH, Bolouri H. Brown CT, et al. Among authors: rust ag. Dev Biol. 2002 Jun 1;246(1):86-102. doi: 10.1006/dbio.2002.0619. Dev Biol. 2002. PMID: 12027436 Free article.
A data integration methodology for systems biology: experimental verification.
Hwang D, Smith JJ, Leslie DM, Weston AD, Rust AG, Ramsey S, de Atauri P, Siegel AF, Bolouri H, Aitchison JD, Hood L. Hwang D, et al. Among authors: rust ag. Proc Natl Acad Sci U S A. 2005 Nov 29;102(48):17302-7. doi: 10.1073/pnas.0508649102. Epub 2005 Nov 21. Proc Natl Acad Sci U S A. 2005. PMID: 16301536 Free PMC article.
A data integration methodology for systems biology.
Hwang D, Rust AG, Ramsey S, Smith JJ, Leslie DM, Weston AD, de Atauri P, Aitchison JD, Hood L, Siegel AF, Bolouri H. Hwang D, et al. Among authors: rust ag. Proc Natl Acad Sci U S A. 2005 Nov 29;102(48):17296-301. doi: 10.1073/pnas.0508647102. Epub 2005 Nov 21. Proc Natl Acad Sci U S A. 2005. PMID: 16301537 Free PMC article.
Uncovering a macrophage transcriptional program by integrating evidence from motif scanning and expression dynamics.
Ramsey SA, Klemm SL, Zak DE, Kennedy KA, Thorsson V, Li B, Gilchrist M, Gold ES, Johnson CD, Litvak V, Navarro G, Roach JC, Rosenberger CM, Rust AG, Yudkovsky N, Aderem A, Shmulevich I. Ramsey SA, et al. Among authors: rust ag. PLoS Comput Biol. 2008 Mar 21;4(3):e1000021. doi: 10.1371/journal.pcbi.1000021. PLoS Comput Biol. 2008. PMID: 18369420 Free PMC article.
67 results