Schroth GP - Search Results

1

Noncanonical compensation of zygotic X transcription in early Drosophila melanogaster development revealed through single-embryo RNA-seq.

Lott SE, Villalta JE, Schroth GP, Luo S, Tonkin LA, Eisen MB. Lott SE, et al. Among authors: schroth gp. PLoS Biol. 2011 Feb 8;9(2):e1000590. doi: 10.1371/journal.pbio.1000590. PLoS Biol. 2011. PMID: 21346796 Free PMC article.

2

mRNA-Seq of single prostate cancer circulating tumor cells reveals recapitulation of gene expression and pathways found in prostate cancer.

Cann GM, Gulzar ZG, Cooper S, Li R, Luo S, Tat M, Stuart S, Schroth G, Srinivas S, Ronaghi M, Brooks JD, Talasaz AH. Cann GM, et al. PLoS One. 2012;7(11):e49144. doi: 10.1371/journal.pone.0049144. Epub 2012 Nov 7. PLoS One. 2012. PMID: 23145101 Free PMC article.

3

High-resolution analysis of parent-of-origin allelic expression in the mouse brain.

Gregg C, Zhang J, Weissbourd B, Luo S, Schroth GP, Haig D, Dulac C. Gregg C, et al. Among authors: schroth gp. Science. 2010 Aug 6;329(5992):643-8. doi: 10.1126/science.1190830. Epub 2010 Jul 8. Science. 2010. PMID: 20616232 Free PMC article.

4

Integrated analysis of gene expression, CpG island methylation, and gene copy number in breast cancer cells by deep sequencing.

Sun Z, Asmann YW, Kalari KR, Bot B, Eckel-Passow JE, Baker TR, Carr JM, Khrebtukova I, Luo S, Zhang L, Schroth GP, Perez EA, Thompson EA. Sun Z, et al. Among authors: schroth gp. PLoS One. 2011 Feb 25;6(2):e17490. doi: 10.1371/journal.pone.0017490. PLoS One. 2011. PMID: 21364760 Free PMC article.

5

Duplex-specific nuclease efficiently removes rRNA for prokaryotic RNA-seq.

Yi H, Cho YJ, Won S, Lee JE, Jin Yu H, Kim S, Schroth GP, Luo S, Chun J. Yi H, et al. Among authors: schroth gp. Nucleic Acids Res. 2011 Nov 1;39(20):e140. doi: 10.1093/nar/gkr617. Epub 2011 Aug 31. Nucleic Acids Res. 2011. PMID: 21880599 Free PMC article.

6

Alternative isoform regulation in human tissue transcriptomes.

Wang ET, Sandberg R, Luo S, Khrebtukova I, Zhang L, Mayr C, Kingsmore SF, Schroth GP, Burge CB. Wang ET, et al. Among authors: schroth gp. Nature. 2008 Nov 27;456(7221):470-6. doi: 10.1038/nature07509. Nature. 2008. PMID: 18978772 Free PMC article.

7

Modeling and automation of sequencing-based characterization of RNA structure.

Aviran S, Trapnell C, Lucks JB, Mortimer SA, Luo S, Schroth GP, Doudna JA, Arkin AP, Pachter L. Aviran S, et al. Among authors: schroth gp. Proc Natl Acad Sci U S A. 2011 Jul 5;108(27):11069-74. doi: 10.1073/pnas.1106541108. Epub 2011 Jun 3. Proc Natl Acad Sci U S A. 2011. PMID: 21642536 Free PMC article.

8

Meraculous: de novo genome assembly with short paired-end reads.

Chapman JA, Ho I, Sunkara S, Luo S, Schroth GP, Rokhsar DS. Chapman JA, et al. Among authors: schroth gp. PLoS One. 2011;6(8):e23501. doi: 10.1371/journal.pone.0023501. Epub 2011 Aug 18. PLoS One. 2011. PMID: 21876754 Free PMC article.

9

Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells.

Ramsköld D, Luo S, Wang YC, Li R, Deng Q, Faridani OR, Daniels GA, Khrebtukova I, Loring JF, Laurent LC, Schroth GP, Sandberg R. Ramsköld D, et al. Among authors: schroth gp. Nat Biotechnol. 2012 Aug;30(8):777-82. doi: 10.1038/nbt.2282. Nat Biotechnol. 2012. PMID: 22820318 Free PMC article.

10

Single-neuron RNA-Seq: technical feasibility and reproducibility.

Qiu S, Luo S, Evgrafov O, Li R, Schroth GP, Levitt P, Knowles JA, Wang K. Qiu S, et al. Among authors: schroth gp. Front Genet. 2012 Jul 6;3:124. doi: 10.3389/fgene.2012.00124. eCollection 2012. Front Genet. 2012. PMID: 22934102 Free PMC article.

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