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Transcriptome analysis of Pseudomonas syringae identifies new genes, noncoding RNAs, and antisense activity.
Filiatrault MJ, Stodghill PV, Bronstein PA, Moll S, Lindeberg M, Grills G, Schweitzer P, Wang W, Schroth GP, Luo S, Khrebtukova I, Yang Y, Thannhauser T, Butcher BG, Cartinhour S, Schneider DJ. Filiatrault MJ, et al. Among authors: schweitzer p. J Bacteriol. 2010 May;192(9):2359-72. doi: 10.1128/JB.01445-09. Epub 2010 Feb 26. J Bacteriol. 2010. PMID: 20190049 Free PMC article.
Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study.
Li S, Tighe SW, Nicolet CM, Grove D, Levy S, Farmerie W, Viale A, Wright C, Schweitzer PA, Gao Y, Kim D, Boland J, Hicks B, Kim R, Chhangawala S, Jafari N, Raghavachari N, Gandara J, Garcia-Reyero N, Hendrickson C, Roberson D, Rosenfeld J, Smith T, Underwood JG, Wang M, Zumbo P, Baldwin DA, Grills GS, Mason CE. Li S, et al. Among authors: schweitzer pa. Nat Biotechnol. 2014 Sep;32(9):915-925. doi: 10.1038/nbt.2972. Epub 2014 Aug 24. Nat Biotechnol. 2014. PMID: 25150835 Free PMC article.
A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice.
Wierbowski SD, Vo TV, Falter-Braun P, Jobe TO, Kruse LH, Wei X, Liang J, Meyer MJ, Akturk N, Rivera-Erick CA, Cordero NA, Paramo MI, Shayhidin EE, Bertolotti M, Tippens ND, Akther K, Sharma R, Katayose Y, Salehi-Ashtiani K, Hao T, Ronald PC, Ecker JR, Schweitzer PA, Kikuchi S, Mizuno H, Hill DE, Vidal M, Moghe GD, McCouch SR, Yu H. Wierbowski SD, et al. Among authors: schweitzer pa. Proc Natl Acad Sci U S A. 2020 May 26;117(21):11836-11842. doi: 10.1073/pnas.1918068117. Epub 2020 May 12. Proc Natl Acad Sci U S A. 2020. PMID: 32398372 Free PMC article.
A cattle-human comparative map built with cattle BAC-ends and human genome sequence.
Larkin DM, Everts-van der Wind A, Rebeiz M, Schweitzer PA, Bachman S, Green C, Wright CL, Campos EJ, Benson LD, Edwards J, Liu L, Osoegawa K, Womack JE, de Jong PJ, Lewin HA. Larkin DM, et al. Genome Res. 2003 Aug;13(8):1966-72. doi: 10.1101/gr.1560203. Genome Res. 2003. PMID: 12902387 Free PMC article.
A novel iterative mixed model to remap three complex orthopedic traits in dogs.
Huang M, Hayward JJ, Corey E, Garrison SJ, Wagner GR, Krotscheck U, Hayashi K, Schweitzer PA, Lust G, Boyko AR, Todhunter RJ. Huang M, et al. PLoS One. 2017 Jun 14;12(6):e0176932. doi: 10.1371/journal.pone.0176932. eCollection 2017. PLoS One. 2017. PMID: 28614352 Free PMC article.
A next-generation marker genotyping platform (AmpSeq) in heterozygous crops: a case study for marker-assisted selection in grapevine.
Yang S, Fresnedo-Ramírez J, Wang M, Cote L, Schweitzer P, Barba P, Takacs EM, Clark M, Luby J, Manns DC, Sacks G, Mansfield AK, Londo J, Fennell A, Gadoury D, Reisch B, Cadle-Davidson L, Sun Q. Yang S, et al. Among authors: schweitzer p. Hortic Res. 2016 Feb 17;3:16002. doi: 10.1038/hortres.2016.2. eCollection 2016. Hortic Res. 2016. PMID: 27257505 Free PMC article.
Microarrays for global expression constructed with a low redundancy set of 27,500 sequenced cDNAs representing an array of developmental stages and physiological conditions of the soybean plant.
Vodkin LO, Khanna A, Shealy R, Clough SJ, Gonzalez DO, Philip R, Zabala G, Thibaud-Nissen F, Sidarous M, Strömvik MV, Shoop E, Schmidt C, Retzel E, Erpelding J, Shoemaker RC, Rodriguez-Huete AM, Polacco JC, Coryell V, Keim P, Gong G, Liu L, Pardinas J, Schweitzer P. Vodkin LO, et al. Among authors: schweitzer p. BMC Genomics. 2004 Sep 29;5:73. doi: 10.1186/1471-2164-5-73. BMC Genomics. 2004. PMID: 15453914 Free PMC article.
310 results