Siegele DA - Search Results

1

High-throughput, quantitative analyses of genetic interactions in E. coli.

Typas A, Nichols RJ, Siegele DA, Shales M, Collins SR, Lim B, Braberg H, Yamamoto N, Takeuchi R, Wanner BL, Mori H, Weissman JS, Krogan NJ, Gross CA. Typas A, et al. Among authors: siegele da. Nat Methods. 2008 Sep;5(9):781-7. doi: 10.1038/nmeth.1240. Nat Methods. 2008. PMID: 19160513 Free PMC article.

2

Heat shock transcription factor σ32 co-opts the signal recognition particle to regulate protein homeostasis in E. coli.

Lim B, Miyazaki R, Neher S, Siegele DA, Ito K, Walter P, Akiyama Y, Yura T, Gross CA. Lim B, et al. Among authors: siegele da. PLoS Biol. 2013 Dec;11(12):e1001735. doi: 10.1371/journal.pbio.1001735. Epub 2013 Dec 17. PLoS Biol. 2013. PMID: 24358019 Free PMC article.

3

Mutations in rpoD, the gene encoding the sigma 70 subunit of Escherichia coli RNA polymerase, that increase expression of the lac operon in the absence of CAP-cAMP.

Siegele DA, Hu JC, Gross CA. Siegele DA, et al. J Mol Biol. 1988 Sep 5;203(1):29-37. doi: 10.1016/0022-2836(88)90088-5. J Mol Biol. 1988. PMID: 2846853

4

Altered promoter recognition by mutant forms of the sigma 70 subunit of Escherichia coli RNA polymerase.

Siegele DA, Hu JC, Walter WA, Gross CA. Siegele DA, et al. J Mol Biol. 1989 Apr 20;206(4):591-603. doi: 10.1016/0022-2836(89)90568-8. J Mol Biol. 1989. PMID: 2661828

5

Polypeptides containing highly conserved regions of transcription initiation factor sigma 70 exhibit specificity of binding to promoter DNA.

Dombroski AJ, Walter WA, Record MT Jr, Siegele DA, Gross CA. Dombroski AJ, et al. Among authors: siegele da. Cell. 1992 Aug 7;70(3):501-12. doi: 10.1016/0092-8674(92)90174-b. Cell. 1992. PMID: 1643661

6

The regulation of transcription initiation in bacteria.

Reznikoff WS, Siegele DA, Cowing DW, Gross CA. Reznikoff WS, et al. Among authors: siegele da. Annu Rev Genet. 1985;19:355-87. doi: 10.1146/annurev.ge.19.120185.002035. Annu Rev Genet. 1985. PMID: 3936407 Review. No abstract available.

7

PortEco: a resource for exploring bacterial biology through high-throughput data and analysis tools.

Hu JC, Sherlock G, Siegele DA, Aleksander SA, Ball CA, Demeter J, Gouni S, Holland TA, Karp PD, Lewis JE, Liles NM, McIntosh BK, Mi H, Muruganujan A, Wymore F, Thomas PD, Altman T. Hu JC, et al. Among authors: siegele da. Nucleic Acids Res. 2014 Jan;42(Database issue):D677-84. doi: 10.1093/nar/gkt1203. Epub 2013 Nov 26. Nucleic Acids Res. 2014. PMID: 24285306 Free PMC article.

8

The emerging world of wikis.

Hu JC, Aramayo R, Bolser D, Conway T, Elsik CG, Gribskov M, Kelder T, Kihara D, Knight TF Jr, Pico AR, Siegele DA, Wanner BL, Welch RD. Hu JC, et al. Among authors: siegele da. Science. 2008 Jun 6;320(5881):1289-90. doi: 10.1126/science.320.5881.1289b. Science. 2008. PMID: 18535227 No abstract available.

9

Insights from the reanalysis of high-throughput chemical genomics data for Escherichia coli K-12.

Wu PI, Ross C, Siegele DA, Hu JC. Wu PI, et al. Among authors: siegele da. G3 (Bethesda). 2021 Jan 18;11(1):jkaa035. doi: 10.1093/g3journal/jkaa035. G3 (Bethesda). 2021. PMID: 33561236 Free PMC article.

10

Microbial competition: Escherichia coli mutants that take over stationary phase cultures.

Zambrano MM, Siegele DA, Almirón M, Tormo A, Kolter R. Zambrano MM, et al. Among authors: siegele da. Science. 1993 Mar 19;259(5102):1757-60. doi: 10.1126/science.7681219. Science. 1993. PMID: 7681219

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