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I-COMS: Interprotein-COrrelated Mutations Server.
Iserte J, Simonetti FL, Zea DJ, Teppa E, Marino-Buslje C. Iserte J, et al. Among authors: simonetti fl. Nucleic Acids Res. 2015 Jul 1;43(W1):W320-5. doi: 10.1093/nar/gkv572. Epub 2015 Jun 1. Nucleic Acids Res. 2015. PMID: 26032772 Free PMC article.
MISTIC: Mutual information server to infer coevolution.
Simonetti FL, Teppa E, Chernomoretz A, Nielsen M, Marino Buslje C. Simonetti FL, et al. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W8-14. doi: 10.1093/nar/gkt427. Epub 2013 May 28. Nucleic Acids Res. 2013. PMID: 23716641 Free PMC article.
Kin-Driver: a database of driver mutations in protein kinases.
Simonetti FL, Tornador C, Nabau-Moretó N, Molina-Vila MA, Marino-Buslje C. Simonetti FL, et al. Database (Oxford). 2014 Nov 19;2014:bau104. doi: 10.1093/database/bau104. Print 2014. Database (Oxford). 2014. PMID: 25414382 Free PMC article.
Tejaas: reverse regression increases power for detecting trans-eQTLs.
Banerjee S, Simonetti FL, Detrois KE, Kaphle A, Mitra R, Nagial R, Söding J. Banerjee S, et al. Among authors: simonetti fl. Genome Biol. 2021 May 6;22(1):142. doi: 10.1186/s13059-021-02361-8. Genome Biol. 2021. PMID: 33957961 Free PMC article.