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Do genome-scale models need exact solvers or clearer standards?
Ebrahim A, Almaas E, Bauer E, Bordbar A, Burgard AP, Chang RL, Dräger A, Famili I, Feist AM, Fleming RM, Fong SS, Hatzimanikatis V, Herrgård MJ, Holder A, Hucka M, Hyduke D, Jamshidi N, Lee SY, Le Novère N, Lerman JA, Lewis NE, Ma D, Mahadevan R, Maranas C, Nagarajan H, Navid A, Nielsen J, Nielsen LK, Nogales J, Noronha A, Pal C, Palsson BO, Papin JA, Patil KR, Price ND, Reed JL, Saunders M, Senger RS, Sonnenschein N, Sun Y, Thiele I. Ebrahim A, et al. Among authors: sonnenschein n. Mol Syst Biol. 2015 Oct 14;11(10):831. doi: 10.15252/msb.20156157. Mol Syst Biol. 2015. PMID: 26467284 Free PMC article. No abstract available.
A community-driven global reconstruction of human metabolism.
Thiele I, Swainston N, Fleming RM, Hoppe A, Sahoo S, Aurich MK, Haraldsdottir H, Mo ML, Rolfsson O, Stobbe MD, Thorleifsson SG, Agren R, Bölling C, Bordel S, Chavali AK, Dobson P, Dunn WB, Endler L, Hala D, Hucka M, Hull D, Jameson D, Jamshidi N, Jonsson JJ, Juty N, Keating S, Nookaew I, Le Novère N, Malys N, Mazein A, Papin JA, Price ND, Selkov E Sr, Sigurdsson MI, Simeonidis E, Sonnenschein N, Smallbone K, Sorokin A, van Beek JH, Weichart D, Goryanin I, Nielsen J, Westerhoff HV, Kell DB, Mendes P, Palsson BØ. Thiele I, et al. Among authors: sonnenschein n. Nat Biotechnol. 2013 May;31(5):419-25. doi: 10.1038/nbt.2488. Epub 2013 Mar 3. Nat Biotechnol. 2013. PMID: 23455439 Free PMC article.
Evolution reveals a glutathione-dependent mechanism of 3-hydroxypropionic acid tolerance.
Kildegaard KR, Hallström BM, Blicher TH, Sonnenschein N, Jensen NB, Sherstyk S, Harrison SJ, Maury J, Herrgård MJ, Juncker AS, Forster J, Nielsen J, Borodina I. Kildegaard KR, et al. Among authors: sonnenschein n. Metab Eng. 2014 Nov;26:57-66. doi: 10.1016/j.ymben.2014.09.004. Epub 2014 Sep 28. Metab Eng. 2014. PMID: 25263954 Free article.
Editorial: Current Challenges in Modeling Cellular Metabolism.
Machado D, Zhuang KH, Sonnenschein N, Herrgård MJ. Machado D, et al. Among authors: sonnenschein n. Front Bioeng Biotechnol. 2015 Nov 26;3:193. doi: 10.3389/fbioe.2015.00193. eCollection 2015. Front Bioeng Biotechnol. 2015. PMID: 26636080 Free PMC article. No abstract available.
Systems biology solutions for biochemical production challenges.
Hansen ASL, Lennen RM, Sonnenschein N, Herrgård MJ. Hansen ASL, et al. Among authors: sonnenschein n. Curr Opin Biotechnol. 2017 Jun;45:85-91. doi: 10.1016/j.copbio.2016.11.018. Epub 2017 Mar 16. Curr Opin Biotechnol. 2017. PMID: 28319856 Free article. Review.
44 results