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Comparative analyses of CTCF and BORIS occupancies uncover two distinct classes of CTCF binding genomic regions.
Pugacheva EM, Rivero-Hinojosa S, Espinoza CA, Méndez-Catalá CF, Kang S, Suzuki T, Kosaka-Suzuki N, Robinson S, Nagarajan V, Ye Z, Boukaba A, Rasko JE, Strunnikov AV, Loukinov D, Ren B, Lobanenkov VV. Pugacheva EM, et al. Among authors: strunnikov av. Genome Biol. 2015 Aug 14;16(1):161. doi: 10.1186/s13059-015-0736-8. Genome Biol. 2015. PMID: 26268681 Free PMC article.
The structural complexity of the human BORIS gene in gametogenesis and cancer.
Pugacheva EM, Suzuki T, Pack SD, Kosaka-Suzuki N, Yoon J, Vostrov AA, Barsov E, Strunnikov AV, Morse HC 3rd, Loukinov D, Lobanenkov V. Pugacheva EM, et al. Among authors: strunnikov av. PLoS One. 2010 Nov 8;5(11):e13872. doi: 10.1371/journal.pone.0013872. PLoS One. 2010. PMID: 21079786 Free PMC article.
The cancer-associated CTCFL/BORIS protein targets multiple classes of genomic repeats, with a distinct binding and functional preference for humanoid-specific SVA transposable elements.
Pugacheva EM, Teplyakov E, Wu Q, Li J, Chen C, Meng C, Liu J, Robinson S, Loukinov D, Boukaba A, Hutchins AP, Lobanenkov V, Strunnikov A. Pugacheva EM, et al. Epigenetics Chromatin. 2016 Aug 31;9(1):35. doi: 10.1186/s13072-016-0084-2. eCollection 2016. Epigenetics Chromatin. 2016. PMID: 27588042 Free PMC article.
CTCF mediates chromatin looping via N-terminal domain-dependent cohesin retention.
Pugacheva EM, Kubo N, Loukinov D, Tajmul M, Kang S, Kovalchuk AL, Strunnikov AV, Zentner GE, Ren B, Lobanenkov VV. Pugacheva EM, et al. Among authors: strunnikov av. Proc Natl Acad Sci U S A. 2020 Jan 28;117(4):2020-2031. doi: 10.1073/pnas.1911708117. Epub 2020 Jan 14. Proc Natl Acad Sci U S A. 2020. PMID: 31937660 Free PMC article.
Ectopic expression of meiotic cohesin generates chromosome instability in cancer cell line.
Boukaba A, Liu J, Ward C, Wu Q, Arnaoutov A, Liang J, Pugacheva EM, Dasso M, Lobanenkov V, Esteban M, Strunnikov AV. Boukaba A, et al. Among authors: strunnikov av. Proc Natl Acad Sci U S A. 2022 Oct 4;119(40):e2204071119. doi: 10.1073/pnas.2204071119. Epub 2022 Sep 30. Proc Natl Acad Sci U S A. 2022. PMID: 36179046 Free PMC article.
Mapping separase-mediated cleavage in situ.
Boukaba A, Wu Q, Liu J, Chen C, Liang J, Li J, Strunnikov AV. Boukaba A, et al. Among authors: strunnikov av. NAR Genom Bioinform. 2022 Nov 18;4(4):lqac085. doi: 10.1093/nargab/lqac085. eCollection 2022 Dec. NAR Genom Bioinform. 2022. PMID: 36415827 Free PMC article.
54 results