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Stochastic processes are key determinants of short-term evolution in influenza a virus.
Nelson MI, Simonsen L, Viboud C, Miller MA, Taylor J, George KS, Griesemer SB, Ghedin E, Sengamalay NA, Spiro DJ, Volkov I, Grenfell BT, Lipman DJ, Taubenberger JK, Holmes EC. Nelson MI, et al. Among authors: taylor j. PLoS Pathog. 2006 Dec;2(12):e125. doi: 10.1371/journal.ppat.0020125. PLoS Pathog. 2006. PMID: 17140286 Free PMC article.
Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution.
Ghedin E, Sengamalay NA, Shumway M, Zaborsky J, Feldblyum T, Subbu V, Spiro DJ, Sitz J, Koo H, Bolotov P, Dernovoy D, Tatusova T, Bao Y, St George K, Taylor J, Lipman DJ, Fraser CM, Taubenberger JK, Salzberg SL. Ghedin E, et al. Among authors: taylor j. Nature. 2005 Oct 20;437(7062):1162-6. doi: 10.1038/nature04239. Epub 2005 Oct 5. Nature. 2005. PMID: 16208317
Zika Virus Testing Considerations: Lessons Learned from the First 80 Real-Time Reverse Transcription-PCR-Positive Cases Diagnosed in New York State.
St George K, Sohi IS, Dufort EM, Dean AB, White JL, Limberger R, Sommer JN, Ostrowski S, Wong SJ, Backenson PB, Kuhles D, Blog D, Taylor J, Hutton B, Zucker HA. St George K, et al. Among authors: taylor j. J Clin Microbiol. 2017 Feb;55(2):535-544. doi: 10.1128/JCM.01232-16. Epub 2016 Dec 7. J Clin Microbiol. 2017. PMID: 27927917 Free PMC article.
Isolation of avian paramyxovirus 1 from a patient with a lethal case of pneumonia.
Goebel SJ, Taylor J, Barr BC, Kiehn TE, Castro-Malaspina HR, Hedvat CV, Rush-Wilson KA, Kelly CD, Davis SW, Samsonoff WA, Hurst KR, Behr MJ, Masters PS. Goebel SJ, et al. Among authors: taylor j. J Virol. 2007 Nov;81(22):12709-14. doi: 10.1128/JVI.01406-07. Epub 2007 Sep 12. J Virol. 2007. PMID: 17855523 Free PMC article.
Monitoring Coronavirus Disease 2019 (COVID-19) Through Trends in Influenza-like Illness, Laboratory-confirmed Influenza, and COVID-19-New York State, Excluding New York City, 1 January 2020-12 April 2020.
Rosenberg ES, Hall EW, Rosenthal EM, Maxted AM, Gowie DL, Dufort EM, Blog DS, Hoefer D, George KS, Hutton BJ, Zucker HA; New York State Coronavirus 2019 Response Team. Rosenberg ES, et al. Clin Infect Dis. 2021 Jan 23;72(1):144-147. doi: 10.1093/cid/ciaa684. Clin Infect Dis. 2021. PMID: 32474578 Free PMC article.
Prevalence of drug-resistant and nonsubtype B HIV strains in antiretroviral-naïve, HIV-infected individuals in New York State.
Parker MM, Gordon D, Reilly A, Horowitz HW, Waters M, Bennett R, Hallack R, Smith J, Lamson D, Aydemir A, Dvali N, Agins BD, Drusano GL, Taylor J; Resistance Study Group. Parker MM, et al. Among authors: taylor j. AIDS Patient Care STDS. 2007 Sep;21(9):644-52. doi: 10.1089/apc.2006.0172. AIDS Patient Care STDS. 2007. PMID: 17919091
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