Thompson MJ - Search Results

1

Transproteomic evidence of a loop-deletion mechanism for enhancing protein thermostability.

Thompson MJ, Eisenberg D. Thompson MJ, et al. J Mol Biol. 1999 Jul 9;290(2):595-604. doi: 10.1006/jmbi.1999.2889. J Mol Biol. 1999. PMID: 10390356

2

Assigning protein functions by comparative genome analysis: protein phylogenetic profiles.

Pellegrini M, Marcotte EM, Thompson MJ, Eisenberg D, Yeates TO. Pellegrini M, et al. Among authors: thompson mj. Proc Natl Acad Sci U S A. 1999 Apr 13;96(8):4285-8. doi: 10.1073/pnas.96.8.4285. Proc Natl Acad Sci U S A. 1999. PMID: 10200254 Free PMC article.

3

A combined algorithm for genome-wide prediction of protein function.

Marcotte EM, Pellegrini M, Thompson MJ, Yeates TO, Eisenberg D. Marcotte EM, et al. Among authors: thompson mj. Nature. 1999 Nov 4;402(6757):83-6. doi: 10.1038/47048. Nature. 1999. PMID: 10573421

4

DIP: The Database of Interacting Proteins: 2001 update.

Xenarios I, Fernandez E, Salwinski L, Duan XJ, Thompson MJ, Marcotte EM, Eisenberg D. Xenarios I, et al. Among authors: thompson mj. Nucleic Acids Res. 2001 Jan 1;29(1):239-41. doi: 10.1093/nar/29.1.239. Nucleic Acids Res. 2001. PMID: 11125102 Free PMC article.

5

Inference of protein function and protein linkages in Mycobacterium tuberculosis based on prokaryotic genome organization: a combined computational approach.

Strong M, Mallick P, Pellegrini M, Thompson MJ, Eisenberg D. Strong M, et al. Among authors: thompson mj. Genome Biol. 2003;4(9):R59. doi: 10.1186/gb-2003-4-9-r59. Epub 2003 Aug 29. Genome Biol. 2003. PMID: 12952538 Free PMC article.

6

Visualization and interpretation of protein networks in Mycobacterium tuberculosis based on hierarchical clustering of genome-wide functional linkage maps.

Strong M, Graeber TG, Beeby M, Pellegrini M, Thompson MJ, Yeates TO, Eisenberg D. Strong M, et al. Among authors: thompson mj. Nucleic Acids Res. 2003 Dec 15;31(24):7099-109. doi: 10.1093/nar/gkg924. Nucleic Acids Res. 2003. PMID: 14654685 Free PMC article.

7

Prolinks: a database of protein functional linkages derived from coevolution.

Bowers PM, Pellegrini M, Thompson MJ, Fierro J, Yeates TO, Eisenberg D. Bowers PM, et al. Among authors: thompson mj. Genome Biol. 2004;5(5):R35. doi: 10.1186/gb-2004-5-5-r35. Epub 2004 Apr 16. Genome Biol. 2004. PMID: 15128449 Free PMC article.

8

The 3D profile method for identifying fibril-forming segments of proteins.

Thompson MJ, Sievers SA, Karanicolas J, Ivanova MI, Baker D, Eisenberg D. Thompson MJ, et al. Proc Natl Acad Sci U S A. 2006 Mar 14;103(11):4074-8. doi: 10.1073/pnas.0511295103. Epub 2006 Mar 7. Proc Natl Acad Sci U S A. 2006. PMID: 16537487 Free PMC article.

9

A systematic screen of beta(2)-microglobulin and insulin for amyloid-like segments.

Ivanova MI, Thompson MJ, Eisenberg D. Ivanova MI, et al. Among authors: thompson mj. Proc Natl Acad Sci U S A. 2006 Mar 14;103(11):4079-82. doi: 10.1073/pnas.0511298103. Epub 2006 Mar 7. Proc Natl Acad Sci U S A. 2006. PMID: 16537488 Free PMC article.

10

Atomic structures of amyloid cross-beta spines reveal varied steric zippers.

Sawaya MR, Sambashivan S, Nelson R, Ivanova MI, Sievers SA, Apostol MI, Thompson MJ, Balbirnie M, Wiltzius JJ, McFarlane HT, Madsen AØ, Riekel C, Eisenberg D. Sawaya MR, et al. Among authors: thompson mj. Nature. 2007 May 24;447(7143):453-7. doi: 10.1038/nature05695. Epub 2007 Apr 29. Nature. 2007. PMID: 17468747

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