Watson SJ - Search Results

1

Generation and characterization of influenza A viruses with altered polymerase fidelity.

Cheung PP, Watson SJ, Choy KT, Fun Sia S, Wong DD, Poon LL, Kellam P, Guan Y, Malik Peiris JS, Yen HL. Cheung PP, et al. Among authors: watson sj. Nat Commun. 2014 Sep 3;5:4794. doi: 10.1038/ncomms5794. Nat Commun. 2014. PMID: 25183443 Free PMC article.

2

Evolutionary dynamics of local pandemic H1N1/2009 influenza virus lineages revealed by whole-genome analysis.

Baillie GJ, Galiano M, Agapow PM, Myers R, Chiam R, Gall A, Palser AL, Watson SJ, Hedge J, Underwood A, Platt S, McLean E, Pebody RG, Rambaut A, Green J, Daniels R, Pybus OG, Kellam P, Zambon M. Baillie GJ, et al. Among authors: watson sj. J Virol. 2012 Jan;86(1):11-8. doi: 10.1128/JVI.05347-11. Epub 2011 Oct 19. J Virol. 2012. PMID: 22013031 Free PMC article.

3

Marked endotheliotropism of highly pathogenic avian influenza virus H5N1 following intestinal inoculation in cats.

Reperant LA, van de Bildt MW, van Amerongen G, Leijten LM, Watson S, Palser A, Kellam P, Eissens AC, Frijlink HW, Osterhaus AD, Kuiken T. Reperant LA, et al. J Virol. 2012 Jan;86(2):1158-65. doi: 10.1128/JVI.06375-11. Epub 2011 Nov 16. J Virol. 2012. PMID: 22090101 Free PMC article.

4

Specific capture and whole-genome sequencing of viruses from clinical samples.

Depledge DP, Palser AL, Watson SJ, Lai IY, Gray ER, Grant P, Kanda RK, Leproust E, Kellam P, Breuer J. Depledge DP, et al. Among authors: watson sj. PLoS One. 2011;6(11):e27805. doi: 10.1371/journal.pone.0027805. Epub 2011 Nov 18. PLoS One. 2011. PMID: 22125625 Free PMC article.

5

Analysis of high-depth sequence data for studying viral diversity: a comparison of next generation sequencing platforms using Segminator II.

Archer J, Baillie G, Watson SJ, Kellam P, Rambaut A, Robertson DL. Archer J, et al. Among authors: watson sj. BMC Bioinformatics. 2012 Mar 23;13:47. doi: 10.1186/1471-2105-13-47. BMC Bioinformatics. 2012. PMID: 22443413 Free PMC article.

6

Universal amplification, next-generation sequencing, and assembly of HIV-1 genomes.

Gall A, Ferns B, Morris C, Watson S, Cotten M, Robinson M, Berry N, Pillay D, Kellam P. Gall A, et al. J Clin Microbiol. 2012 Dec;50(12):3838-44. doi: 10.1128/JCM.01516-12. Epub 2012 Sep 19. J Clin Microbiol. 2012. PMID: 22993180 Free PMC article.

7

Viral population analysis and minority-variant detection using short read next-generation sequencing.

Watson SJ, Welkers MR, Depledge DP, Coulter E, Breuer JM, de Jong MD, Kellam P. Watson SJ, et al. Philos Trans R Soc Lond B Biol Sci. 2013 Feb 4;368(1614):20120205. doi: 10.1098/rstb.2012.0205. Print 2013 Mar 19. Philos Trans R Soc Lond B Biol Sci. 2013. PMID: 23382427 Free PMC article.

8

Full-genome deep sequencing and phylogenetic analysis of novel human betacoronavirus.

Cotten M, Lam TT, Watson SJ, Palser AL, Petrova V, Grant P, Pybus OG, Rambaut A, Guan Y, Pillay D, Kellam P, Nastouli E. Cotten M, et al. Among authors: watson sj. Emerg Infect Dis. 2013 May;19(5):736-42B. doi: 10.3201/eid1905.130057. Emerg Infect Dis. 2013. PMID: 23693015 Free PMC article.

9

Modeling the association of space, time, and host species with variation of the HA, NA, and NS genes of H5N1 highly pathogenic avian influenza viruses isolated from birds in Romania in 2005-2007.

Alkhamis M, Perez A, Batey N, Howard W, Baillie G, Watson S, Franz S, Focosi-Snyman R, Onita I, Cioranu R, Turcitu M, Kellam P, Brown IH, Breed AC. Alkhamis M, et al. Avian Dis. 2013 Sep;57(3):612-21. doi: 10.1637/10494-011713-Reg.1. Avian Dis. 2013. PMID: 24283126 Free PMC article.

10

Full genome virus detection in fecal samples using sensitive nucleic acid preparation, deep sequencing, and a novel iterative sequence classification algorithm.

Cotten M, Oude Munnink B, Canuti M, Deijs M, Watson SJ, Kellam P, van der Hoek L. Cotten M, et al. Among authors: watson sj. PLoS One. 2014 Apr 2;9(4):e93269. doi: 10.1371/journal.pone.0093269. eCollection 2014. PLoS One. 2014. PMID: 24695106 Free PMC article.

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