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Page 1
Structure of the dopamine D2 receptor in complex with the antipsychotic drug spiperone.
Im D, Inoue A, Fujiwara T, Nakane T, Yamanaka Y, Uemura T, Mori C, Shiimura Y, Kimura KT, Asada H, Nomura N, Tanaka T, Yamashita A, Nango E, Tono K, Kadji FMN, Aoki J, Iwata S, Shimamura T. Im D, et al. Among authors: yamashita a. Nat Commun. 2020 Dec 22;11(1):6442. doi: 10.1038/s41467-020-20221-0. Nat Commun. 2020. PMID: 33353947 Free PMC article.
Conformational alterations in unidirectional ion transport of a light-driven chloride pump revealed using X-ray free electron lasers.
Hosaka T, Nomura T, Kubo M, Nakane T, Fangjia L, Sekine SI, Ito T, Murayama K, Ihara K, Ehara H, Kashiwagi K, Katsura K, Akasaka R, Hisano T, Tanaka T, Tanaka R, Arima T, Yamashita A, Sugahara M, Naitow H, Matsuura Y, Yoshizawa S, Tono K, Owada S, Nureki O, Kimura-Someya T, Iwata S, Nango E, Shirouzu M. Hosaka T, et al. Among authors: yamashita a. Proc Natl Acad Sci U S A. 2022 Mar 1;119(9):e2117433119. doi: 10.1073/pnas.2117433119. Proc Natl Acad Sci U S A. 2022. PMID: 35197289 Free PMC article.
Serial femtosecond crystallography structure of cytochrome c oxidase at room temperature.
Andersson R, Safari C, Dods R, Nango E, Tanaka R, Yamashita A, Nakane T, Tono K, Joti Y, Båth P, Dunevall E, Bosman R, Nureki O, Iwata S, Neutze R, Brändén G. Andersson R, et al. Among authors: yamashita a. Sci Rep. 2017 Jul 3;7(1):4518. doi: 10.1038/s41598-017-04817-z. Sci Rep. 2017. PMID: 28674417 Free PMC article.
XFEL structures of the influenza M2 proton channel: Room temperature water networks and insights into proton conduction.
Thomaston JL, Woldeyes RA, Nakane T, Yamashita A, Tanaka T, Koiwai K, Brewster AS, Barad BA, Chen Y, Lemmin T, Uervirojnangkoorn M, Arima T, Kobayashi J, Masuda T, Suzuki M, Sugahara M, Sauter NK, Tanaka R, Nureki O, Tono K, Joti Y, Nango E, Iwata S, Yumoto F, Fraser JS, DeGrado WF. Thomaston JL, et al. Among authors: yamashita a. Proc Natl Acad Sci U S A. 2017 Dec 19;114(51):13357-13362. doi: 10.1073/pnas.1705624114. Epub 2017 Aug 23. Proc Natl Acad Sci U S A. 2017. PMID: 28835537 Free PMC article.
Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
Maestre-Reyna M, Yang CH, Nango E, Huang WC, Ngurah Putu EPG, Wu WJ, Wang PH, Franz-Badur S, Saft M, Emmerich HJ, Wu HY, Lee CC, Huang KF, Chang YK, Liao JH, Weng JH, Gad W, Chang CW, Pang AH, Sugahara M, Owada S, Hosokawa Y, Joti Y, Yamashita A, Tanaka R, Tanaka T, Luo F, Tono K, Hsu KC, Kiontke S, Schapiro I, Spadaccini R, Royant A, Yamamoto J, Iwata S, Essen LO, Bessho Y, Tsai MD. Maestre-Reyna M, et al. Among authors: yamashita a. Nat Chem. 2022 Jun;14(6):677-685. doi: 10.1038/s41557-022-00922-3. Epub 2022 Apr 7. Nat Chem. 2022. PMID: 35393554
Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate.
Tosha T, Nomura T, Nishida T, Saeki N, Okubayashi K, Yamagiwa R, Sugahara M, Nakane T, Yamashita K, Hirata K, Ueno G, Kimura T, Hisano T, Muramoto K, Sawai H, Takeda H, Mizohata E, Yamashita A, Kanematsu Y, Takano Y, Nango E, Tanaka R, Nureki O, Shoji O, Ikemoto Y, Murakami H, Owada S, Tono K, Yabashi M, Yamamoto M, Ago H, Iwata S, Sugimoto H, Shiro Y, Kubo M. Tosha T, et al. Among authors: yamashita a, yamashita k. Nat Commun. 2017 Nov 17;8(1):1585. doi: 10.1038/s41467-017-01702-1. Nat Commun. 2017. PMID: 29147002 Free PMC article.
Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL.
Suga M, Akita F, Sugahara M, Kubo M, Nakajima Y, Nakane T, Yamashita K, Umena Y, Nakabayashi M, Yamane T, Nakano T, Suzuki M, Masuda T, Inoue S, Kimura T, Nomura T, Yonekura S, Yu LJ, Sakamoto T, Motomura T, Chen JH, Kato Y, Noguchi T, Tono K, Joti Y, Kameshima T, Hatsui T, Nango E, Tanaka R, Naitow H, Matsuura Y, Yamashita A, Yamamoto M, Nureki O, Yabashi M, Ishikawa T, Iwata S, Shen JR. Suga M, et al. Among authors: yamashita a, yamashita k. Nature. 2017 Mar 2;543(7643):131-135. doi: 10.1038/nature21400. Epub 2017 Feb 20. Nature. 2017. PMID: 28219079 Free article.
A three-dimensional movie of structural changes in bacteriorhodopsin.
Nango E, Royant A, Kubo M, Nakane T, Wickstrand C, Kimura T, Tanaka T, Tono K, Song C, Tanaka R, Arima T, Yamashita A, Kobayashi J, Hosaka T, Mizohata E, Nogly P, Sugahara M, Nam D, Nomura T, Shimamura T, Im D, Fujiwara T, Yamanaka Y, Jeon B, Nishizawa T, Oda K, Fukuda M, Andersson R, Båth P, Dods R, Davidsson J, Matsuoka S, Kawatake S, Murata M, Nureki O, Owada S, Kameshima T, Hatsui T, Joti Y, Schertler G, Yabashi M, Bondar AN, Standfuss J, Neutze R, Iwata S. Nango E, et al. Among authors: yamashita a. Science. 2016 Dec 23;354(6319):1552-1557. doi: 10.1126/science.aah3497. Science. 2016. PMID: 28008064
Visualizing the DNA repair process by a photolyase at atomic resolution.
Maestre-Reyna M, Wang PH, Nango E, Hosokawa Y, Saft M, Furrer A, Yang CH, Gusti Ngurah Putu EP, Wu WJ, Emmerich HJ, Caramello N, Franz-Badur S, Yang C, Engilberge S, Wranik M, Glover HL, Weinert T, Wu HY, Lee CC, Huang WC, Huang KF, Chang YK, Liao JH, Weng JH, Gad W, Chang CW, Pang AH, Yang KC, Lin WT, Chang YC, Gashi D, Beale E, Ozerov D, Nass K, Knopp G, Johnson PJM, Cirelli C, Milne C, Bacellar C, Sugahara M, Owada S, Joti Y, Yamashita A, Tanaka R, Tanaka T, Luo F, Tono K, Zarzycka W, Müller P, Alahmad MA, Bezold F, Fuchs V, Gnau P, Kiontke S, Korf L, Reithofer V, Rosner CJ, Seiler EM, Watad M, Werel L, Spadaccini R, Yamamoto J, Iwata S, Zhong D, Standfuss J, Royant A, Bessho Y, Essen LO, Tsai MD. Maestre-Reyna M, et al. Among authors: yamashita a. Science. 2023 Dec;382(6674):eadd7795. doi: 10.1126/science.add7795. Epub 2023 Dec 1. Science. 2023. PMID: 38033054
1,757 results