Zhang MQ - Search Results

1

Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-Based Regulation of Transcription.

Xiao R, Chen JY, Liang Z, Luo D, Chen G, Lu ZJ, Chen Y, Zhou B, Li H, Du X, Yang Y, San M, Wei X, Liu W, Lécuyer E, Graveley BR, Yeo GW, Burge CB, Zhang MQ, Zhou Y, Fu XD. Xiao R, et al. Among authors: zhang mq. Cell. 2019 Jun 27;178(1):107-121.e18. doi: 10.1016/j.cell.2019.06.001. Cell. 2019. PMID: 31251911 Free PMC article.

2

Profiling alternatively spliced mRNA isoforms for prostate cancer classification.

Zhang C, Li HR, Fan JB, Wang-Rodriguez J, Downs T, Fu XD, Zhang MQ. Zhang C, et al. Among authors: zhang mq. BMC Bioinformatics. 2006 Apr 11;7:202. doi: 10.1186/1471-2105-7-202. BMC Bioinformatics. 2006. PMID: 16608523 Free PMC article.

3

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome.

Kim TH, Abdullaev ZK, Smith AD, Ching KA, Loukinov DI, Green RD, Zhang MQ, Lobanenkov VV, Ren B. Kim TH, et al. Among authors: zhang mq. Cell. 2007 Mar 23;128(6):1231-45. doi: 10.1016/j.cell.2006.12.048. Cell. 2007. PMID: 17382889 Free PMC article.

4

Epigenomic analysis of multilineage differentiation of human embryonic stem cells.

Xie W, Schultz MD, Lister R, Hou Z, Rajagopal N, Ray P, Whitaker JW, Tian S, Hawkins RD, Leung D, Yang H, Wang T, Lee AY, Swanson SA, Zhang J, Zhu Y, Kim A, Nery JR, Urich MA, Kuan S, Yen CA, Klugman S, Yu P, Suknuntha K, Propson NE, Chen H, Edsall LE, Wagner U, Li Y, Ye Z, Kulkarni A, Xuan Z, Chung WY, Chi NC, Antosiewicz-Bourget JE, Slukvin I, Stewart R, Zhang MQ, Wang W, Thomson JA, Ecker JR, Ren B. Xie W, et al. Among authors: zhang mq, zhang j. Cell. 2013 May 23;153(5):1134-48. doi: 10.1016/j.cell.2013.04.022. Epub 2013 May 9. Cell. 2013. PMID: 23664764 Free PMC article.

5

Nucleosome eviction and multiple co-factor binding predict estrogen-receptor-alpha-associated long-range interactions.

He C, Wang X, Zhang MQ. He C, et al. Among authors: zhang mq. Nucleic Acids Res. 2014 Jun;42(11):6935-44. doi: 10.1093/nar/gku327. Epub 2014 Apr 29. Nucleic Acids Res. 2014. PMID: 24782518 Free PMC article.

6

Genome-wide map of regulatory interactions in the human genome.

Heidari N, Phanstiel DH, He C, Grubert F, Jahanbani F, Kasowski M, Zhang MQ, Snyder MP. Heidari N, et al. Among authors: zhang mq. Genome Res. 2014 Dec;24(12):1905-17. doi: 10.1101/gr.176586.114. Epub 2014 Sep 16. Genome Res. 2014. PMID: 25228660 Free PMC article.

7

Gene module based regulator inference identifying miR-139 as a tumor suppressor in colorectal cancer.

Gu J, Chen Y, Huang H, Yin L, Xie Z, Zhang MQ. Gu J, et al. Among authors: zhang mq. Mol Biosyst. 2014 Dec;10(12):3249-54. doi: 10.1039/c4mb00329b. Epub 2014 Oct 7. Mol Biosyst. 2014. PMID: 25286864

8

A common set of distinct features that characterize noncoding RNAs across multiple species.

Hu L, Di C, Kai M, Yang YC, Li Y, Qiu Y, Hu X, Yip KY, Zhang MQ, Lu ZJ. Hu L, et al. Among authors: zhang mq. Nucleic Acids Res. 2015 Jan;43(1):104-14. doi: 10.1093/nar/gku1316. Epub 2014 Dec 12. Nucleic Acids Res. 2015. PMID: 25505163 Free PMC article.

9

CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function.

Guo Y, Xu Q, Canzio D, Shou J, Li J, Gorkin DU, Jung I, Wu H, Zhai Y, Tang Y, Lu Y, Wu Y, Jia Z, Li W, Zhang MQ, Ren B, Krainer AR, Maniatis T, Wu Q. Guo Y, et al. Among authors: zhang mq. Cell. 2015 Aug 13;162(4):900-10. doi: 10.1016/j.cell.2015.07.038. Cell. 2015. PMID: 26276636 Free PMC article.

10

Histone Deacetylases Positively Regulate Transcription through the Elongation Machinery.

Greer CB, Tanaka Y, Kim YJ, Xie P, Zhang MQ, Park IH, Kim TH. Greer CB, et al. Among authors: zhang mq. Cell Rep. 2015 Nov 17;13(7):1444-1455. doi: 10.1016/j.celrep.2015.10.013. Epub 2015 Nov 5. Cell Rep. 2015. PMID: 26549458 Free PMC article.

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