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Systematic Mapping of RNA-Chromatin Interactions In Vivo.
Sridhar B, Rivas-Astroza M, Nguyen TC, Chen W, Yan Z, Cao X, Hebert L, Zhong S. Sridhar B, et al. Among authors: zhong s. Curr Biol. 2017 Feb 20;27(4):602-609. doi: 10.1016/j.cub.2017.01.011. Epub 2017 Jan 26. Curr Biol. 2017. PMID: 28132817 Free PMC article.
GIVE: portable genome browsers for personal websites.
Cao X, Yan Z, Wu Q, Zheng A, Zhong S. Cao X, et al. Among authors: zhong s. Genome Biol. 2018 Jul 18;19(1):92. doi: 10.1186/s13059-018-1465-6. Genome Biol. 2018. PMID: 30016975 Free PMC article.
GITAR: An Open Source Tool for Analysis and Visualization of Hi-C Data.
Calandrelli R, Wu Q, Guan J, Zhong S. Calandrelli R, et al. Among authors: zhong s. Genomics Proteomics Bioinformatics. 2018 Oct;16(5):365-372. doi: 10.1016/j.gpb.2018.06.006. Epub 2018 Dec 13. Genomics Proteomics Bioinformatics. 2018. PMID: 30553884 Free PMC article.
Genome-wide colocalization of RNA-DNA interactions and fusion RNA pairs.
Yan Z, Huang N, Wu W, Chen W, Jiang Y, Chen J, Huang X, Wen X, Xu J, Jin Q, Zhang K, Chen Z, Chien S, Zhong S. Yan Z, et al. Among authors: zhong s. Proc Natl Acad Sci U S A. 2019 Feb 19;116(8):3328-3337. doi: 10.1073/pnas.1819788116. Epub 2019 Feb 4. Proc Natl Acad Sci U S A. 2019. PMID: 30718424 Free PMC article.
Mapping RNA-chromatin interactions by sequencing with iMARGI.
Wu W, Yan Z, Nguyen TC, Bouman Chen Z, Chien S, Zhong S. Wu W, et al. Among authors: zhong s. Nat Protoc. 2019 Nov;14(11):3243-3272. doi: 10.1038/s41596-019-0229-4. Epub 2019 Oct 16. Nat Protoc. 2019. PMID: 31619811 Free PMC article.
4,205 results