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Year | Number of Results |
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2018 | 1 |
2021 | 1 |
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Page 1
Harnessing protein folding neural networks for peptide-protein docking.
Nat Commun. 2022 Jan 10;13(1):176. doi: 10.1038/s41467-021-27838-9.
Nat Commun. 2022.
PMID: 35013344
Free PMC article.
Matching protein surface structural patches for high-resolution blind peptide docking.
Khramushin A, Ben-Aharon Z, Tsaban T, Varga JK, Avraham O, Schueler-Furman O.
Khramushin A, et al. Among authors: ben aharon z.
Proc Natl Acad Sci U S A. 2022 May 3;119(18):e2121153119. doi: 10.1073/pnas.2121153119. Epub 2022 Apr 28.
Proc Natl Acad Sci U S A. 2022.
PMID: 35482919
Free PMC article.
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Protein language models can capture protein quaternary state.
Avraham O, Tsaban T, Ben-Aharon Z, Tsaban L, Schueler-Furman O.
Avraham O, et al. Among authors: ben aharon z.
BMC Bioinformatics. 2023 Nov 14;24(1):433. doi: 10.1186/s12859-023-05549-w.
BMC Bioinformatics. 2023.
PMID: 37964216
Free PMC article.
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Ensuring scientific reproducibility in bio-macromolecular modeling via extensive, automated benchmarks.
Koehler Leman J, Lyskov S, Lewis SM, Adolf-Bryfogle J, Alford RF, Barlow K, Ben-Aharon Z, Farrell D, Fell J, Hansen WA, Harmalkar A, Jeliazkov J, Kuenze G, Krys JD, Ljubetič A, Loshbaugh AL, Maguire J, Moretti R, Mulligan VK, Nance ML, Nguyen PT, Ó Conchúir S, Roy Burman SS, Samanta R, Smith ST, Teets F, Tiemann JKS, Watkins A, Woods H, Yachnin BJ, Bahl CD, Bailey-Kellogg C, Baker D, Das R, DiMaio F, Khare SD, Kortemme T, Labonte JW, Lindorff-Larsen K, Meiler J, Schief W, Schueler-Furman O, Siegel JB, Stein A, Yarov-Yarovoy V, Kuhlman B, Leaver-Fay A, Gront D, Gray JJ, Bonneau R.
Koehler Leman J, et al. Among authors: ben aharon z.
Nat Commun. 2021 Nov 29;12(1):6947. doi: 10.1038/s41467-021-27222-7.
Nat Commun. 2021.
PMID: 34845212
Free PMC article.
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Automatic Inference of Sequence from Low-Resolution Crystallographic Data.
Ben-Aharon Z, Levitt M, Kalisman N.
Ben-Aharon Z, et al.
Structure. 2018 Nov 6;26(11):1546-1554.e2. doi: 10.1016/j.str.2018.08.011. Epub 2018 Oct 4.
Structure. 2018.
PMID: 30293812
Free PMC article.
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