Characterization of the 1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene (DDE) degradation system in Janibacter sp. TYM3221

Enzyme Microb Technol. 2011 Dec 10;49(6-7):532-9. doi: 10.1016/j.enzmictec.2011.06.017. Epub 2011 Jun 30.

Abstract

Bacterial degradation of 1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene (DDE) has been previously reported, however, its degradation enzyme system has not been characterized. In this study, a DDE-degrading bacterium, Janibacter sp. TYM3221, was isolated and characterized. Transformation of DDE was demonstrated by TYM3211 resting cells grown in LB in the presence and absence of biphenyl. Gas chromatography-mass spectrometry analysis revealed five metabolites of DDE containing a meta-ring cleavage product and 4-chlorobenzoic acid, suggesting that TYM3221 degrades DDE to 4-chlorobenzoic acid via a meta-ring cleavage product. A gene cluster, bphAaAbAcAd, which codes for biphenyl dioxygenase subunits, was cloned from TYM3221. A mutant strain with a bphAa-gene inactivation did not grow on biphenyl, and showed no DDE degradation activity. These results indicate that in strain TYM3221, the bphAa-coded biphenyl dioxygenase is involved not only in the metabolism of biphenyl but also in the degradation of DDE.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actinomycetales / classification
  • Actinomycetales / genetics
  • Actinomycetales / isolation & purification
  • Actinomycetales / metabolism*
  • Bacterial Proteins / antagonists & inhibitors
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Base Sequence
  • Biodegradation, Environmental
  • Biphenyl Compounds / metabolism
  • Cloning, Molecular
  • DNA, Bacterial / genetics
  • Dichlorodiphenyl Dichloroethylene / metabolism*
  • Genes, Bacterial
  • Insecticides / metabolism
  • Metabolic Networks and Pathways
  • Molecular Sequence Data
  • Multigene Family
  • Mutation
  • Oxygenases / antagonists & inhibitors
  • Oxygenases / genetics
  • Oxygenases / metabolism
  • Phylogeny

Substances

  • Bacterial Proteins
  • Biphenyl Compounds
  • DNA, Bacterial
  • Insecticides
  • diphenyl
  • Dichlorodiphenyl Dichloroethylene
  • Oxygenases

Associated data

  • GENBANK/AB609316
  • GENBANK/AB609317