Molecular analysis of NAD⁺-dependent xylitol dehydrogenase from the zygomycetous fungus Rhizomucor pusillus and reversal of the coenzyme preference

Biosci Biotechnol Biochem. 2014;78(11):1943-53. doi: 10.1080/09168451.2014.943646. Epub 2014 Aug 1.

Abstract

The zygomycetous fungus Rhizomucor pusillus NBRC 4578 is able to ferment not only d-glucose but also d-xylose into ethanol. Xylitol dehydrogenase from R. pusillus NBRC 4578 (RpXDH), which catalyzes the second step of d-xylose metabolism, was purified, and its enzymatic properties were characterized. The purified RpXDH preferred NAD(+) as its coenzyme and showed substrate specificity for xylitol, d-sorbitol, and ribitol. cDNA cloning of xyl2 gene encoding RpXDH revealed that the gene included a coding sequence of 1,092 bp with a molecular mass of 39,185 kDa. Expression of the xyl2 in R. pusillus NBRC 4578 was induced by d-xylose, and the expression levels were increased with accumulation of xylitol. The xyl2 gene was expressed in Escherichia coli, and coenzyme preference of the recombinant RpXDH was reversed from NAD(+) to NADP(+) in the double mutant D205A/I206R by site-directed mutagenesis.

Keywords: Rhizomucor pusillus; coenzyme preference; d-xylose metabolism; xylitol dehydrogenase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cloning, Molecular
  • Coenzymes / metabolism
  • Models, Biological
  • Molecular Structure
  • NAD / metabolism*
  • Oxidoreductases / chemistry
  • Oxidoreductases / genetics*
  • Rhizomucor / chemistry
  • Rhizomucor / enzymology*
  • Xylose / chemistry

Substances

  • Coenzymes
  • NAD
  • Xylose
  • Oxidoreductases