Enzymes of the benzoyl-coenzyme A degradation pathway in the hyperthermophilic archaeon Ferroglobus placidus

Environ Microbiol. 2015 Sep;17(9):3289-300. doi: 10.1111/1462-2920.12785. Epub 2015 Mar 2.

Abstract

The Fe(III)-respiring Ferroglobus placidus is the only known archaeon and hyperthermophile for which a complete degradation of aromatic substrates to CO2 has been reported. Recent genome and transcriptome analyses proposed a benzoyl-coenzyme A (CoA) degradation pathway similar to that found in the phototrophic Rhodopseudomonas palustris, which involves a cyclohex-1-ene-1-carboxyl-CoA (1-enoyl-CoA) forming, ATP-dependent key enzyme benzoyl-CoA reductase (BCR). In this work, we demonstrate, by first in vitro studies, that benzoyl-CoA is ATP-dependently reduced by two electrons to cyclohexa-1,5-dienoyl-CoA (1,5-dienoyl-CoA), which is further degraded by hydration to 6-hydroxycyclohex-1-ene-1-carboxyl-CoA (6-OH-1-enoyl-CoA); upon addition of NAD(+) , the latter was subsequently converted to β-oxidation intermediates. The four candidate genes of BCR were heterologously expressed, and the enriched, oxygen-sensitive enzyme catalysed the two-electron reduction of benzoyl-CoA to 1,5-dienoyl-CoA. A gene previously assigned to a 2,3-didehydropimeloyl-CoA hydratase was heterologously expressed and shown to act as a typical 1,5-dienoyl-CoA hydratase that does not accept 1-enoyl-CoA. A gene previously assigned to a 1-enoyl-CoA hydratase was heterologously expressed and identified to code for a bifunctional crotonase/3-OH-butyryl-CoA dehydrogenase. In summary, the results consistently provide biochemical evidence that F. placidus and probably other archaea predominantly degrade aromatics via the Thauera/Azoarcus type and not or only to a minor extent via the predicted R. palustris-type benzoyl-CoA degradation pathway.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acyl Coenzyme A / metabolism*
  • Anaerobiosis
  • Archaeoglobales / enzymology*
  • Archaeoglobales / genetics
  • Coenzyme A / metabolism
  • Enoyl-CoA Hydratase / metabolism
  • Ferric Compounds / metabolism
  • Hydro-Lyases / metabolism
  • Metabolic Networks and Pathways / physiology*
  • Oxidoreductases Acting on CH-CH Group Donors / metabolism
  • Thauera / metabolism

Substances

  • Acyl Coenzyme A
  • Ferric Compounds
  • benzoyl-coenzyme A
  • Oxidoreductases Acting on CH-CH Group Donors
  • benzoyl-coenzyme A reductase (dearomatizing)
  • Hydro-Lyases
  • cyclohexa-1,5-diene-1-carboxyl-CoA hydratase
  • Enoyl-CoA Hydratase
  • Coenzyme A