Screening, identification, and characterization of α-xylosidase from a soil metagenome

J Biosci Bioeng. 2016 Oct;122(4):393-9. doi: 10.1016/j.jbiosc.2016.03.012. Epub 2016 Apr 10.

Abstract

A novel α-xylosidase, MeXyl31, was isolated and characterized from a soil metagenomic library. The amino acid sequence of MeXyl31 showed a slight homology with other characterized α-xylosidases. The optimal pH and temperature of recombinant MeXyl31 were pH 5.5 and 45°C, respectively. Recombinant MeXyl31 had a higher α-xylosidase activity toward pNP α-d-xylopyranoside than pNP α-d-glucopyranoside, isoprimeverose, and other xyloglucan oligosaccharides. The kcat/Km value toward pNP α-d-xylopyranoside was about 750-fold higher than that of isoprimeverose. MeXyl31 activity was strongly inactivated in the presence of zinc and copper ions. MeXyl31 is the first α-xylosidase isolated from the metagenome and, relative to other xyloglucan oligosaccharides, shows higher activity toward pNP α-d-xylopyranoside.

Keywords: GH31; Metagenome; Xyloglucan; Xylose; α-Xylosidase.

MeSH terms

  • Amino Acid Sequence
  • Copper / pharmacology
  • Evolution, Molecular
  • Glucans / metabolism
  • Hydrogen-Ion Concentration
  • Metagenome*
  • Oligosaccharides / metabolism
  • Soil Microbiology*
  • Substrate Specificity
  • Temperature
  • Xylans / metabolism
  • Xylosidases / chemistry
  • Xylosidases / genetics
  • Xylosidases / isolation & purification
  • Xylosidases / metabolism*
  • Zinc / pharmacology

Substances

  • Glucans
  • Oligosaccharides
  • Xylans
  • xyloglucan
  • Copper
  • Xylosidases
  • Zinc