Identification and Characterization of the Sulfazecin Monobactam Biosynthetic Gene Cluster

Cell Chem Biol. 2017 Jan 19;24(1):24-34. doi: 10.1016/j.chembiol.2016.11.010. Epub 2016 Dec 22.

Abstract

The monobactams, exemplified by the natural product sulfazecin, are the only class of β-lactam antibiotics not inactivated by metallo-β-lactamases, which confer bacteria with extended-spectrum β-lactam resistance. We screened a transposon mutagenesis library from Pseudomonas acidophila ATCC 31363 and isolated a sulfazecin-deficient mutant that revealed a gene cluster encoding two non-ribosomal peptide synthetases (NRPSs), a methyltransferase, a sulfotransferase, and a dioxygenase. Three modules and an aberrant C-terminal thioesterase (TE) domain are distributed across the two NRPSs. Biochemical examination of the adenylation (A) domains provided evidence that L-2,3-diaminopropionate, not L-serine as previously thought, is the direct source of the β-lactam ring of sulfazecin. ATP/PPi exchange assay also revealed an unusual substrate selectivity shift of one A domain when expressed with or without the immediately upstream condensation domain. Gene inactivation analysis defined a cluster of 13 open reading frames sufficient for sulfazecin production, precursor synthesis, self-resistance, and regulation. The identification of a key intermediate supported a proposed NRPS-mediated mechanism of sulfazecin biosynthesis and β-lactam ring formation distinct from the nocardicins, another NRPS-derived subclass of monocyclic β-lactam. These findings will serve as the basis for further biosynthetic research and potential engineering of these important antibiotics.

Keywords: antibiotic; biosynthesis; metallo-β-lactamase; natural product; non-ribosomal peptide synthetase; sulfazecin; sulfotransferase; β-lactam.

MeSH terms

  • Drug Resistance, Multiple, Bacterial / drug effects
  • Molecular Conformation
  • Monobactams / biosynthesis*
  • Monobactams / chemistry
  • Monobactams / pharmacology
  • Multigene Family / genetics*
  • Peptide Synthases / genetics
  • Peptide Synthases / metabolism
  • Pseudomonas / genetics
  • Pseudomonas / metabolism*
  • beta-Lactams / metabolism

Substances

  • Monobactams
  • beta-Lactams
  • Peptide Synthases
  • sulfazecin