Expression and biochemical characterization of α-ketoglutarate decarboxylase from cyanobacterium Synechococcus sp. PCC7002

Int J Biol Macromol. 2018 Jul 15:114:188-193. doi: 10.1016/j.ijbiomac.2018.03.112. Epub 2018 Mar 21.

Abstract

α-Ketoglutarate decarboxylase (α-KGD), one member of α-keto acid decarboxylases, catalyzing non-oxidative decarboxylation of α-ketoglutarate to form succinic semialdehyde, was proposed to play critical role in completing tricarboxylic acid (TCA) cycle of cyanobacteria. Although the catalytic function of α-KGD from Synechococcus sp. PCC7002 was demonstrated previously, there was no detailed biochemical characterization of α-KGD from Synechococcus sp. PCC7002 yet. In this study, the gene encoding α-KGD from Synechococcus sp. PCC7002 was amplified and soluble expression of recombinant α-KGD was achieved by coexpressing with pTf16 chaperone plasmid in E. coli BL21 (DE3). Kinetic analysis showed that the activity of α-KGD was dependent on cofactors of thiamine pyrophosphate and divalent cation. Meanwhile this α-KGD was specific for α-ketoglutarate with respect to the decarboxylation activity despite of the pretty low activity of acetolactate synthase. The catalytic efficiency of α-KGD (the values of kcat and kcat/Km for α-ketoglutarate were 1.2s-1 and 6.3×103M-1s-1, respectively) might provide evidence for its physiological role in TCA cycle of Synechococcus sp. PCC7002.

Keywords: Catalytic function; Kinetic characterization; Protein expression; Synechococcus sp. PCC7002; α-Ketoglutarate decarboxylase.

MeSH terms

  • Bacterial Proteins* / biosynthesis
  • Bacterial Proteins* / chemistry
  • Bacterial Proteins* / genetics
  • Bacterial Proteins* / isolation & purification
  • Gene Expression*
  • Ketoglutarate Dehydrogenase Complex* / biosynthesis
  • Ketoglutarate Dehydrogenase Complex* / chemistry
  • Ketoglutarate Dehydrogenase Complex* / genetics
  • Ketoglutarate Dehydrogenase Complex* / isolation & purification
  • Recombinant Proteins / biosynthesis
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / isolation & purification
  • Synechococcus / enzymology*
  • Synechococcus / genetics

Substances

  • Bacterial Proteins
  • Recombinant Proteins
  • Ketoglutarate Dehydrogenase Complex