Enhanced catalytic efficiency and coenzyme affinity of leucine dehydrogenase by comprehensive screening strategy for L-tert-leucine synthesis

Appl Microbiol Biotechnol. 2021 May;105(9):3625-3634. doi: 10.1007/s00253-021-11323-w. Epub 2021 Apr 30.

Abstract

L-tert-leucine (L-Tle) is widely used as vital chiral intermediate for pharmaceuticals and as chiral auxiliarie for organocatalysis. L-Tle is generally prepared via the asymmetric reduction of trimethylpyruvate (TMP) catalyzed by NAD+-dependent leucine dehydrogenase (LeuDH). To improve the catalytic efficiency and coenzyme affinity of LeuDH from Bacillus cereus, mutation libraries constructed by error-prone PCR and iterative saturation mutation were screened by two kinds of high-throughput methods. Compared with the wild type, the affinity of the selected mutant E24V/E116V for TMP and NADH increased by 7.7- and 2.8-fold, respectively. And the kcat/Km of E24V/E116V on TMP was 5.4-fold higher than that of the wild type. A coupled reaction comprising LeuDH with glucose dehydrogenase of Bacillus amyloliquefaciens resulted in substrate inhibition at high TMP concentrations (0.5 M), which was overcome by batch-feeding of the TMP substrate. The total turnover number and specific space-time conversion of 0.57 M substrate increased to 11,400 and 22.8 mmol·h-1·L-1·g-1, respectively. KEY POINTS: • The constructed new high-throughput screening strategy takes into account the two indicators of catalytic efficiency and coenzyme affinity. • A more efficient leucine dehydrogenase (LeuDH) mutant (E24V/E116V) was identified. • E24V/E116V has potential for the industrial synthesis of L-tert-leucine.

Keywords: Catalytic efficiency; Directed evolution; Error-prone PCR; High-throughput screening; Iterative saturation mutation; L-tert-leucine; Leucine dehydrogenase.

MeSH terms

  • Catalysis
  • Coenzymes* / metabolism
  • Kinetics
  • Leucine
  • Leucine Dehydrogenase / genetics
  • Leucine Dehydrogenase / metabolism
  • Valine* / analogs & derivatives

Substances

  • Coenzymes
  • 2-amino-3,3-dimethylbutanoic acid
  • Leucine Dehydrogenase
  • Leucine
  • Valine