Biochemical characterization and redesign of the coenzyme specificity of a novel monofunctional NAD+-dependent homoserine dehydrogenase from the human pathogen Neisseria gonorrhoeae

Protein Expr Purif. 2021 Oct:186:105909. doi: 10.1016/j.pep.2021.105909. Epub 2021 May 20.

Abstract

Gonorrhoea, caused by Neisseria gonorrhoeae, is a major global public health concern. Homoserine dehydrogenase (HSD), a key enzyme in the aspartate pathway, is a promising metabolic target against pathogenic infections. In this study, a monofunctional HSD from N. gonorrhoeae (NgHSD) was overexpressed in Escherichia coli and purified to >95% homogeneity for biochemical characterization. Unlike the classic dimeric structure, the purified recombinant NgHSD exists as a tetramer in solution. We determined the enzymatic activity of recombinant NgHSD for l-homoserine oxidation, which revealed that this enzyme was NAD+ dependent, with an approximate 479-fold (kcat/Km) preference for NAD+ over NADP+, and that optimal activity for l-homoserine oxidation occurred at pH 10.5 and 40 °C. At 800 mM, neither NaCl nor KCl increased the activity of NgHSD, in contrast to the behavior of several reported NAD+-independent homologs. Moreover, threonine did not markedly inhibit the oxidation activity of NgHSD. To gain insight into the cofactor specificity, site-directed mutagenesis was used to alter coenzyme specificity. The double mutant L45R/S46R, showing the highest affinity for NADP+, caused a shift in coenzyme preference from NAD+ to NADP+ by a factor of ~974, with a catalytic efficiency comparable with naturally occurring NAD+-independent homologs. Collectively, our results should allow the exploration of drugs targeting NgHSD to treat gonococcal infections and contribute to the prediction of the coenzyme specificity of novel HSDs.

Keywords: Affinity purification; Biochemical properties; Gonococcus; Homoserine dehydrogenase; Site-directed mutagenesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Coenzymes* / chemistry
  • Coenzymes* / metabolism
  • Escherichia coli / genetics
  • Gonorrhea / microbiology
  • Homoserine Dehydrogenase* / genetics
  • Homoserine Dehydrogenase* / metabolism
  • Humans
  • Mutagenesis, Site-Directed
  • NAD* / chemistry
  • NAD* / metabolism
  • NADP / chemistry
  • NADP / metabolism
  • Neisseria gonorrhoeae* / enzymology
  • Neisseria gonorrhoeae* / genetics
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Substrate Specificity / genetics

Substances

  • Bacterial Proteins
  • Coenzymes
  • Recombinant Proteins
  • NAD
  • NADP
  • Homoserine Dehydrogenase