Mechanistic insight into allosteric activation of human pyruvate carboxylase by acetyl-CoA

Mol Cell. 2022 Nov 3;82(21):4116-4130.e6. doi: 10.1016/j.molcel.2022.09.033. Epub 2022 Oct 24.

Abstract

Pyruvate carboxylase (PC) catalyzes the two-step carboxylation of pyruvate to produce oxaloacetate, playing a key role in the maintenance of metabolic homeostasis in cells. Given its involvement in multiple diseases, PC has been regarded as a potential therapeutic target for obesity, diabetes, and cancer. Albeit acetyl-CoA has been recognized as the allosteric regulator of PC for over 60 years, the underlying mechanism of how acetyl-CoA induces PC activation remains enigmatic. Herein, by using time-resolved cryo-electron microscopy, we have captured the snapshots of PC transitional states during its catalytic cycle. These structures and the biochemical studies reveal that acetyl-CoA stabilizes PC in a catalytically competent conformation, which triggers a cascade of events, including ATP hydrolysis and the long-distance communication between the two reactive centers. These findings provide an integrated picture for PC catalysis and unveil the unique allosteric mechanism of acetyl-CoA in an essential biochemical reaction in all kingdoms of life.

Keywords: acetyl-CoA; allosteric regulation; biochemical reactions; cancer; diabetes; metabolism; pyruvate carboxylase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetyl Coenzyme A / metabolism
  • Acetyl-CoA Carboxylase* / metabolism
  • Allosteric Regulation
  • Cryoelectron Microscopy
  • Humans
  • Molecular Conformation
  • Pyruvate Carboxylase* / genetics
  • Pyruvate Carboxylase* / metabolism

Substances

  • Pyruvate Carboxylase
  • Acetyl Coenzyme A
  • Acetyl-CoA Carboxylase