Changing the reaction specificity of a pyridoxal-5'-phosphate-dependent enzyme

Eur J Biochem. 1995 Sep 1;232(2):686-90. doi: 10.1111/j.1432-1033.1995.tb20861.x.

Abstract

The electron distribution in the coenzyme-substrate adduct of aspartate aminotransferase was changed by replacing active-site Arg386 with alanine and introducing a new arginine residue nearby. [Y225R, R386A]Aspartate aminotransferase decarboxylates L-aspartate to L-alanine (kcat = 0.04 s-1), while its transaminase activity towards dicarboxylic amino acids is decreased by three orders of magnitude (kcat = 0.19 s-1). Molecular-dynamics simulations based on the crystal structure of the mutant enzyme suggest that a new hydrogen bond to the imine N atom of the pyridoxal-5'-phosphate- aspartate adduct and an altered electrostatic potential around its beta-carboxylate group underlie the 650,000-fold increase in the ratio of beta-decarboxylase/transaminase activity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aspartate Aminotransferases / chemistry
  • Aspartate Aminotransferases / genetics
  • Aspartate Aminotransferases / metabolism*
  • Binding Sites
  • Carboxy-Lyases / chemistry
  • Carboxy-Lyases / genetics
  • Carboxy-Lyases / metabolism
  • Crystallography, X-Ray
  • Electrochemistry
  • Escherichia coli / enzymology
  • Escherichia coli / genetics
  • Hydrogen Bonding
  • Kinetics
  • Models, Molecular
  • Mutagenesis, Site-Directed
  • Pyridoxal Phosphate / chemistry
  • Pyridoxal Phosphate / metabolism*
  • Substrate Specificity
  • Thermodynamics

Substances

  • Pyridoxal Phosphate
  • Aspartate Aminotransferases
  • Carboxy-Lyases
  • aspartate 4-decarboxylase