Human very-long-chain acyl-CoA synthetase: cloning, topography, and relevance to branched-chain fatty acid metabolism

Biochem Biophys Res Commun. 1999 Apr 13;257(2):615-21. doi: 10.1006/bbrc.1999.0510.


Very-long-chain acyl-CoA synthetases (VLCS) activate very-long-chain fatty acids (VLCFA) containing 22 or more carbons to their CoA derivatives. We cloned the human ortholog (hVLCS) of the gene encoding the rat liver enzyme (rVLCS). Both hVLCS and rVLCS contain 620 amino acids, are expressed primarily in liver and kidney, and have a potential peroxisome targeting signal 1 (-LKL) at their carboxy termini. When expressed in COS-1 cells, hVLCS activated the VLCFA lignoceric acid (C24:0), a long-chain fatty acid (C16:0), and two branched-chain fatty acids, phytanic acid and pristanic acid. Immunofluorescence and immunoblot studies localized hVLCS to both peroxisomes and endoplasmic reticulum. In peroxisomes of HepG2 cells, hVLCS was topographically oriented facing the matrix and not the cytoplasm. This orientation, coupled with the observation that hVLCS activates branched-chain fatty acids, suggests that hVLCS could play a role in the intraperoxisomal reactivation of pristanic acid produced via alpha-oxidation of phytanic acid.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Biomarkers / analysis
  • Cell Line
  • Cloning, Molecular
  • Coenzyme A Ligases / analysis
  • Coenzyme A Ligases / chemistry
  • Coenzyme A Ligases / genetics*
  • Coenzyme A Ligases / metabolism
  • Endoplasmic Reticulum / chemistry
  • Fatty Acids / metabolism*
  • Fluorescent Antibody Technique, Indirect
  • Humans
  • Liver / enzymology
  • Microbodies / chemistry
  • Microbodies / metabolism
  • Molecular Sequence Data
  • Organ Specificity
  • Phytanic Acid / metabolism
  • Rats
  • Sequence Homology, Amino Acid
  • Substrate Specificity
  • Transfection


  • Biomarkers
  • Fatty Acids
  • Phytanic Acid
  • pristanic acid
  • Coenzyme A Ligases
  • lignoceric acid

Associated data

  • GENBANK/AF096290