Physical and meiotic mapping of the region of human chromosome 4q11-q13 encompassing the vitamin D binding protein DBP/Gc-globulin and albumin multigene cluster

Genome Res. 1999 Jun;9(6):581-7.

Abstract

The vitamin D binding protein/Gc-globulin (DBP) gene is a member of a multigene cluster that includes albumin (ALB), alpha-fetoprotein (AFP), and alpha-albumin/afamin (AFM). All four genes have structural and functional similarities and map to the same chromosomal regions in humans (4q11-q13), mice, and rats. An accurate physical map of the region encompassing these genes is a prerequisite for study of their respective transcriptional regulation and identification of potential shared regulatory elements. By refining the physical and meiotic maps of the 4q11-q13 region and creating a local PAC contig, the order and transcriptional orientations of these four genes were determined to be centromere-3'-DBP-5'-5'-ALB-3'-5'-AFP-3'-5'-AFM3'-telomere. The ancestral DBP gene was separated from the ALB gene by >1.5 Mb. This organization and spacing establishes a foundation for ongoing functional studies in this region.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Albumins / genetics*
  • Animals
  • Carrier Proteins*
  • Chromosomes, Human, Pair 4 / genetics*
  • Genetic Markers / genetics
  • Glycoproteins*
  • Humans
  • Meiosis / genetics*
  • Mice
  • Multigene Family / genetics*
  • Physical Chromosome Mapping / methods*
  • Rats
  • Serum Albumin / genetics
  • Serum Albumin, Human
  • Transcription, Genetic / genetics
  • Vitamin D-Binding Protein / genetics*
  • alpha-Fetoproteins / genetics

Substances

  • AFM protein, human
  • Albumins
  • Carrier Proteins
  • Genetic Markers
  • Glycoproteins
  • Serum Albumin
  • Vitamin D-Binding Protein
  • alpha-Fetoproteins
  • Serum Albumin, Human