Junctional diversity in Xenopus immunoglobulin light chains

Mol Immunol. 1999 Dec;36(17):1159-68. doi: 10.1016/s0161-5890(99)00123-6.

Abstract

Xenopus cDNA sequences encoding the homolog of mammalian kappa (kappa) light (L) chains were isolated from isogenic tadpole and adult individuals to investigate whether there existed stage-specific immunoglobulin L chain expression and somatic diversification. In the course of these studies rearrangements to a sixth J(L) gene segment and a pseudogene (J(L)psi) were found, and it is suggested that the order of these gene segments with respect to the L chain constant (C) region exon is: J(L)6-J(L)1-J(L)2-J(L)3-J(L)4-J(L)5-J(L)psi-C(L). The cDNA junctional diversity was analyzed; few N and P regions were found and almost all the CDR3 were 9 codons in length. There were restricted patterns of recombination site resolution, and this is attributed to some constraint in JL coding end processing.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Animals
  • Antibody Diversity*
  • Antibody Formation
  • Base Sequence
  • DNA Primers / genetics
  • DNA, Complementary / genetics
  • Evolution, Molecular
  • Gene Rearrangement, B-Lymphocyte, Light Chain
  • Genes, Immunoglobulin
  • Hybridization, Genetic
  • Immunoglobulin Variable Region / genetics
  • Immunoglobulin kappa-Chains / genetics*
  • Species Specificity
  • Xenopus / genetics*
  • Xenopus / immunology*
  • Xenopus laevis / genetics*
  • Xenopus laevis / immunology*

Substances

  • DNA Primers
  • DNA, Complementary
  • Immunoglobulin Variable Region
  • Immunoglobulin kappa-Chains