An imprinted transcript, antisense to Nesp, adds complexity to the cluster of imprinted genes at the mouse Gnas locus

Proc Natl Acad Sci U S A. 2000 Mar 28;97(7):3342-6. doi: 10.1073/pnas.97.7.3342.

Abstract

The Gnas locus in distal mouse chromosome (Chr) 2 is emerging as a complex genomic region. It contains three imprinted genes in the order Nesp-Gnasxl-Gnas. Gnas encodes a G protein alpha-subunit, and Nesp and Gnasxl encode proteins of unknown function expressed in neuroendocrine tissue. Together, these genes form a single transcription unit because transcripts of Nesp and Gnasxl are alternatively spliced onto exon 2 of Gnas. Nesp and Gnasxl are expressed from opposite parental alleles, with Nesp encoding a maternal-specific transcript and Gnasxl encoding a paternal-specific transcript. We now identify a further imprinted transcript in this cluster. Reverse transcription-PCR analysis of Nesp expression in 15. 5-days-postcoitum embryos carrying only maternal or paternal copies of distal Chr 2 revealed an isoform that is exclusively paternally, rather than maternally, expressed. Strand-specific reverse transcription-PCR showed that this form is an antisense transcript. The existence of a paternally expressed antisense transcript was confirmed by Northern blot analysis. The sequence is contiguous with genomic sequence downstream of Nesp and encompasses Nesp exons 1 and 2 and an intervening intron. We propose that Nespas is an additional control element in the imprinting region of mouse distal Chr 2; it adds further complexity to the Gnas-imprinted gene cluster.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Blotting, Northern
  • Chromogranins
  • DNA
  • GTP-Binding Protein alpha Subunits, Gs*
  • GTP-Binding Proteins / genetics*
  • Gene Expression Regulation
  • Genomic Imprinting*
  • Heterotrimeric GTP-Binding Proteins*
  • Humans
  • Mice
  • Molecular Sequence Data
  • Multigene Family
  • Nerve Tissue Proteins / genetics*
  • RNA, Antisense / genetics*
  • RNA, Messenger / genetics*
  • Sequence Homology, Nucleic Acid

Substances

  • Chromogranins
  • Nerve Tissue Proteins
  • RNA, Antisense
  • RNA, Messenger
  • DNA
  • GNAS protein, human
  • GTP-Binding Proteins
  • Gnas protein, mouse
  • GTP-Binding Protein alpha Subunits, Gs
  • Heterotrimeric GTP-Binding Proteins

Associated data

  • GENBANK/AF173359
  • GENBANK/AF175305
  • GENBANK/AJ245856
  • GENBANK/AJ251480