Genetic analysis of the compatibility between polymerase proteins from human and avian strains of influenza A viruses

J Gen Virol. 2000 May;81(Pt 5):1283-91. doi: 10.1099/0022-1317-81-5-1283.


In order to determine how efficiently the polymerase proteins derived from human and avian influenza A viruses can interact with each other in the context of a mammalian cell, a genetic system that allows the in vivo reconstitution of active ribonucleoproteins was used. The ability to achieve replication of a viral-like reporter RNA in COS-1 cells was examined with heterospecific mixtures of the core proteins (PB1, PB2, PA and NP) from two strains of human viruses (A/Puerto Rico/8/34 and A/Victoria/3/75), two strains of avian viruses (A/Mallard/NY/6750/78 and A/FPV/-Rostock/34), and a strain of avian origin (A/Hong Kong/156/97) that was isolated from the first human case of H5N1 influenza in Hong Kong in 1997. In accordance with published observations on reassortant viruses, PB2 amino acid 627 was identified as a major determinant of the replication efficiency of heterospecific complexes in COS-1 cells. Moreover, the results showed that replication of the viral-like reporter RNA was more efficient when PB2 and NP were both derived from the same avian or human virus or when PB1 was derived from an avian virus, whatever the origin of the other proteins. Furthermore, the PB1 and PB2 proteins from the A/Hong- Kong/156/97 virus exhibited intermediate properties with respect to the corresponding proteins from avian or human influenza viruses, suggesting that some molecular characteristics of PB1 and PB2 proteins might at least partially account for the ability of the A/Hong Kong/156/97 virus to replicate in humans.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • COS Cells
  • Chloramphenicol O-Acetyltransferase
  • Cloning, Molecular
  • DNA, Complementary
  • DNA-Directed RNA Polymerases / genetics
  • DNA-Directed RNA Polymerases / metabolism
  • Humans
  • Influenza A virus / genetics*
  • Influenza A virus / metabolism
  • Molecular Sequence Data
  • Nucleocapsid Proteins
  • Nucleoproteins*
  • Plasmids / genetics
  • RNA Replicase*
  • Sequence Analysis, DNA
  • Transcription, Genetic
  • Transfection
  • Viral Core Proteins / genetics*
  • Viral Core Proteins / metabolism*
  • Viral Proteins / genetics
  • Viral Proteins / metabolism
  • Virus Replication


  • DNA, Complementary
  • Nucleocapsid Proteins
  • Nucleoproteins
  • PA protein, influenza viruses
  • PB2 protein, Influenzavirus A
  • Viral Core Proteins
  • Viral Proteins
  • influenza virus polymerase basic protein 1
  • Chloramphenicol O-Acetyltransferase
  • RNA Replicase
  • DNA-Directed RNA Polymerases

Associated data

  • GENBANK/AJ243990
  • GENBANK/AJ243991
  • GENBANK/AJ243992
  • GENBANK/AJ243993