Molecular cloning and characterization of human FGF-20 on chromosome 8p21.3-p22

Biochem Biophys Res Commun. 2000 Aug 2;274(2):337-43. doi: 10.1006/bbrc.2000.3142.

Abstract

The fibroblast growth factors (FGFs) play important roles in morphogenesis, angiogenesis, tissue remodeling, and carcinogenesis. Human FGF-20 has been cloned and characterized in this study. FGF-20 encodes a 211-amino-acid polypeptide with the FGF-core domain. A strong hydrophobic region was found in the FGF-core domain of FGF-20; however, no typical N-terminal signal sequence was found in FGF-20, just as in FGF-9 and FGF-16. Total amino acid identities are as follows: FGF-20 vs FGF-9, 71.6%; FGF-20 vs FGF-16, 66.2%; FGF-9 vs FGF-16, 72.4%. Phylogenic analysis indicated that FGF-20, FGF-9, and FGF-16 constitute a subfamily among the FGF family. FGF-20 mRNA of 2.4 kb in size was detected in colon cancer cell line SW480 by Northern blot analysis. Lower levels of FGF-20 mRNA were detected in human fetal tissues and primary cancers by cDNA-PCR. The nucleotide sequence of FGF-20 cDNA is split into three parts in the human genome sequence of the chromosome 8p21.3-p22 region (Accession No. AB020858). These results indicate that the FGF-20 gene, located on human chromosome 8p21.3-p22, consists of three exons. Compared with the nucleotide sequence of FGF-20 cDNA determined in this study, one nucleotide deletion and one nucleotide substitution in the putative coding region were identified in human genome sequence AB020858.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing / genetics
  • Animals
  • Base Sequence
  • Blotting, Northern
  • Breast Neoplasms / metabolism
  • Breast Neoplasms / pathology
  • Cell Line
  • Chromosomes, Human, Pair 8 / genetics*
  • Cloning, Molecular*
  • Colonic Neoplasms / metabolism
  • Colonic Neoplasms / pathology
  • DNA, Complementary / genetics
  • DNA, Complementary / isolation & purification
  • Fibroblast Growth Factors / genetics
  • Humans
  • Molecular Sequence Data
  • Phylogeny
  • Polymerase Chain Reaction
  • RNA, Messenger / biosynthesis
  • Sequence Analysis, Protein
  • Sequence Homology, Amino Acid
  • Stomach Neoplasms / metabolism
  • Stomach Neoplasms / pathology
  • Xenopus
  • Xenopus Proteins*

Substances

  • DNA, Complementary
  • RNA, Messenger
  • Xenopus Proteins
  • fibroblast growth factor 20, Xenopus
  • Fibroblast Growth Factors

Associated data

  • GENBANK/AB044277