RNA editing (Q/R site) and flop/flip splicing of AMPA receptor transcripts in young and old brains

Neurobiol Aging. 2000 Jul-Aug;21(4):599-606. doi: 10.1016/s0197-4580(00)00127-5.

Abstract

The effects of aging on the efficiency of RNA processing of AMPA glutamate receptor (GluR) subunits GluR1, GluR2, and GluR 3 was examined for RNA editing at the Q/R site of GluR2 and for alternative splicing of the flip or flop exons for GluR1-3. RNA isolated from six young (3 months old) and old (22-23 months old) animals was reverse-transcribed for PCR and restriction endonuclease analyses to distinguish between edited forms of GluR2 and flip/flop isoforms of GluR1-3. Unedited transcripts of GluR2 at the Q/R site (which controls calcium permeability) were not detected (at the limit of detection of >/= 2.5%) from the corticies and hippocampi of young and old animals. Distribution of flop/flip isoforms in the cortex, hippocampus, hypothalamus, and striatum varied between GluR subunits and brain region, with GluR2 showing the greatest differences. However, no differences in alternative splicing of GluRs 1-3 were observed between young and old animals, suggesting that the fidelity of GluR transcript processing remains intact in the brains of aged animals.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Aging / physiology*
  • Animals
  • Brain Chemistry / genetics*
  • Densitometry
  • Electrophoresis, Agar Gel
  • Gene Expression / physiology
  • Mice
  • Mice, Inbred CBA
  • RNA Editing / physiology*
  • RNA Splicing / physiology*
  • Receptors, AMPA / genetics*
  • Restriction Mapping
  • Reverse Transcriptase Polymerase Chain Reaction
  • Transcription, Genetic / physiology*

Substances

  • Receptors, AMPA
  • glutamate receptor ionotropic, AMPA 3
  • glutamate receptor ionotropic, AMPA 2
  • glutamate receptor ionotropic, AMPA 1