Improved in vivo dimethyl sulfate footprinting using AlkA protein: DNA-protein interactions at the mouse H19 gene promoter in primary embryo fibroblasts

Anal Biochem. 2000 Jul 15;283(1):112-6. doi: 10.1006/abio.2000.4631.
No abstract available

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alkylating Agents / metabolism*
  • Animals
  • Base Sequence
  • DNA / metabolism*
  • DNA Footprinting
  • DNA Glycosylases*
  • Deoxyribonuclease I / metabolism
  • Embryo, Mammalian / metabolism
  • Fibroblasts / metabolism
  • Genetic Techniques*
  • Mice
  • Molecular Sequence Data
  • N-Glycosyl Hydrolases / chemistry
  • N-Glycosyl Hydrolases / genetics
  • N-Glycosyl Hydrolases / metabolism*
  • Piperidines / pharmacology
  • Polymerase Chain Reaction / methods
  • Promoter Regions, Genetic
  • Protein Binding
  • RNA, Long Noncoding
  • RNA, Untranslated / metabolism
  • Sulfuric Acid Esters / metabolism*
  • Ultraviolet Rays

Substances

  • Alkylating Agents
  • H19 long non-coding RNA
  • Piperidines
  • RNA, Long Noncoding
  • RNA, Untranslated
  • Sulfuric Acid Esters
  • piperidine
  • DNA
  • Deoxyribonuclease I
  • DNA Glycosylases
  • N-Glycosyl Hydrolases
  • DNA-3-methyladenine glycosidase II
  • dimethyl sulfate