cDNA cloning, chromosomal localization, and expression analysis of human BEHAB/brevican, a brain specific proteoglycan regulated during cortical development and in glioma

Gene. 2000 Oct 3;256(1-2):139-47. doi: 10.1016/s0378-1119(00)00362-0.


BEHAB (Brain Enriched HyAluronan Binding)/brevican, a brain-specific member of the lectican family of chondroitin sulfate proteoglycans (CSPGs), may play a role in both brain development and human glioma. BEHAB/brevican has been cloned from bovine, mouse and rat. Two isoforms have been reported: a full-length isoform that is secreted into the extracellular matrix (ECM) and a shorter isoform with a sequence that predicts a glycophosphatidylinositol (GPI) anchor. Here, we report the characterization of BEHAB/brevican isoforms in human brain. First, BEHAB/brevican maps to human chromosome 1q31. Second, we report the sequence of both isoforms of human BEHAB/brevican. The deduced protein sequence of full-length, secreted human BEHAB/brevican is 89.7, 83.3 and 83.2% identical to bovine, mouse and rat homologues, respectively. Third, by RNase protection analysis (RPA) we show the developmental regulation of BEHAB/brevican isoforms in normal human cortex. The secreted isoform is highly expressed from birth through 8years of age and is downregulated by 20years of age to low levels that are maintained in the normal adult cortex. The GPI isoform is expressed at uniformly low levels throughout development. Fourth, we confirm and extend previous studies from our laboratory, here demonstrating the upregulation of BEHAB/brevican mRNA in human glioma quantitatively. RPA analysis shows that both isoforms are upregulated in glioma, showing an approximately sevenfold increase in expression over normal levels. In contrast to the developmental regulation of BEHAB/brevican, where only the secreted isoform is regulated, both isoforms are increased in parallel in human glioma. The distinct patterns of regulation of expression of the two isoforms suggest distinct mechanisms of regulation of BEHAB/brevican during development and in glioma.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Brain / metabolism
  • Brevican
  • Carrier Proteins / genetics
  • Cerebral Cortex / growth & development
  • Cerebral Cortex / metabolism*
  • Chondroitin Sulfate Proteoglycans / genetics*
  • Chondroitin Sulfate Proteoglycans / metabolism
  • Chromosome Mapping
  • Chromosomes, Human, Pair 1 / genetics
  • Cloning, Molecular
  • DNA, Complementary / chemistry
  • DNA, Complementary / genetics*
  • Gene Expression
  • Gene Expression Regulation, Developmental
  • Gene Expression Regulation, Neoplastic
  • Glioma / genetics*
  • Humans
  • Lectins, C-Type
  • Molecular Sequence Data
  • Nerve Tissue Proteins / genetics*
  • Nerve Tissue Proteins / metabolism
  • Protein Isoforms / genetics
  • Protein Isoforms / metabolism
  • Proteoglycans / genetics
  • Proteoglycans / metabolism
  • RNA / genetics
  • RNA / metabolism
  • Transcription, Genetic


  • BCAN protein, human
  • Bcan protein, mouse
  • Bcan protein, rat
  • Brevican
  • Carrier Proteins
  • Chondroitin Sulfate Proteoglycans
  • DNA, Complementary
  • Lectins, C-Type
  • Nerve Tissue Proteins
  • Protein Isoforms
  • Proteoglycans
  • RNA

Associated data

  • GENBANK/AF228710
  • GENBANK/AF229053