Pyrimido[1,2-alpha]purin-10(3H)-one: a reactive electrophile in the genome

Chem Res Toxicol. 2000 Oct;13(10):967-70. doi: 10.1021/tx000135i.

Abstract

Malondialdehyde and base propenal react with deoxyguanosine residues in DNA to form an exocyclic adduct, pyrimido[1, 2-alpha]purin-10(3H)-one (1), that has been detected at high levels in genomic DNA of healthy humans. Previous studies have shown that tris(hydroxymethyl)aminomethane adds to 1 at elevated pH, forming an enaminoimine (2), but it is uncertain whether 1 reacts directly or hydrolyzes under basic conditions to N(2)-(3-oxo-1-propenyl)deoxyguanosine (3) prior to amine addition. We report that 1 reacts at neutral pH with hydroxylamines to form oximes. The rate of reaction of 1 with hydroxylamines at pH 7 is at least 150 times faster than the rate of hydrolysis of 1 to 3. Thus, 1 is directly reactive to nucleophiles. These observations indicate that 1 is an electrophile in the human genome that may react with cellular nucleophiles to form novel cross-linked adducts.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • DNA Adducts / chemical synthesis*
  • DNA Adducts / pharmacology
  • Genome
  • Humans
  • Hydrogen-Ion Concentration
  • Hydroxylamines / chemistry
  • Isotope Labeling
  • Malondialdehyde / chemistry
  • Oligonucleotides / chemical synthesis
  • Oligonucleotides / chemistry
  • Phosphorus Radioisotopes
  • Purines / chemical synthesis*
  • Purines / pharmacology
  • Pyrimidines / chemical synthesis*
  • Pyrimidines / pharmacology
  • Spectrophotometry, Ultraviolet

Substances

  • DNA Adducts
  • Hydroxylamines
  • Oligonucleotides
  • Phosphorus Radioisotopes
  • Purines
  • Pyrimidines
  • pyrimido(1,2-a)purin-10(3H)-one
  • Malondialdehyde