Molecular modeling and mutagenesis studies of the N-terminal domains of galectin-3: evidence for participation with the C-terminal carbohydrate recognition domain in oligosaccharide binding

Glycobiology. 2000 Nov;10(11):1201-8. doi: 10.1093/glycob/10.11.1201.

Abstract

A model structure (Henrick,K., Bawumia,S., Barboni,E.A.M., Mehul,B. and Hughes, R.C. (1998) Glycobiology:, 8, 45-57) of the carbohydrate recognition domain (CRD, amino acid residues 114-245) of hamster galectin-3 has been extended to include N-terminal domain amino acid residues 91-113 containing one of the nine proline-rich motifs present in full-length hamster galectin-3. The modeling predicts two configurations of the N-terminal tail: in one the tail turns toward the first (SI) and last (S12) beta-strands of the CRD and lies at the apolar dimer interface observed for galectins -1 and -2. In the second folding arrangement the N-terminal tail lies across the carbohydrate-binding pocket of the CRD where it could participate in sugar-binding: in particular tyrosine 102 and adjacent residues may interact with the partly solvent exposed nonreducing N-acetylgalactosamine and fucose substituents of the A-blood group structure GalNAcalpha1,3 [Fucalpha1,2]Galbeta1,4GlcNAc-R. Binding studies using surface plasmon resonance of a recombinant fragment Delta1-93 protein containing residues 94-245 of hamster galectin-3 and a collagenase-derived fragment Delta1-103 containing residues 104-245, as well as alanine mutagenesis of residues 101-105 in Delta1-93 protein, support the prediction that Tyr102 and adjacent residues make significant contributions to oligosaccharide binding.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Antigens, Differentiation / chemistry*
  • Antigens, Differentiation / genetics*
  • Antigens, Differentiation / metabolism
  • Base Sequence
  • Binding Sites / genetics
  • Cricetinae
  • DNA Primers / genetics
  • Galectin 3
  • Haptens / pharmacology
  • In Vitro Techniques
  • Kinetics
  • Laminin / metabolism
  • Lectins / metabolism
  • Models, Molecular
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed
  • Oligosaccharides / metabolism
  • Protein Conformation
  • Protein Structure, Tertiary
  • Surface Plasmon Resonance

Substances

  • Antigens, Differentiation
  • DNA Primers
  • Galectin 3
  • Haptens
  • Laminin
  • Lectins
  • Oligosaccharides