Crystal structure of the "cab"-type beta class carbonic anhydrase from the archaeon Methanobacterium thermoautotrophicum

J Biol Chem. 2001 Mar 30;276(13):10299-305. doi: 10.1074/jbc.M009182200. Epub 2000 Nov 28.

Abstract

The structure of the "cab"-type beta class carbonic anhydrase from the archaeon Methanobacterium thermoautotrophicum (Cab) has been determined to 2.1-A resolution using the multiwavelength anomalous diffraction phasing technique. Cab exists as a dimer with a subunit fold similar to that observed in "plant"-type beta class carbonic anhydrases. The active site zinc is coordinated by protein ligands Cys(32), His(87), and Cys(90), with the tetrahedral coordination completed by a water molecule. The major difference between plant- and cab-type beta class carbonic anhydrases is in the organization of the hydrophobic pocket. The structure reveals a Hepes buffer molecule bound 8 A away from the active site zinc, which suggests a possible proton transfer pathway from the active site to the solvent.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Archaea / enzymology*
  • Binding Sites
  • Carbonic Anhydrases / chemistry*
  • Crystallography
  • Cysteine / chemistry
  • Histidine / chemistry
  • Kinetics
  • Ligands
  • Methanobacterium / enzymology*
  • Models, Molecular
  • Molecular Sequence Data
  • Protein Conformation
  • Protein Folding
  • Protein Structure, Secondary
  • Protons
  • Sequence Homology, Amino Acid
  • Spectrometry, Fluorescence
  • Water / metabolism
  • Zinc / chemistry

Substances

  • Ligands
  • Protons
  • Water
  • Histidine
  • Carbonic Anhydrases
  • Zinc
  • Cysteine

Associated data

  • PDB/1G5C