The crystal structure of human phosphoglucose isomerase at 1.6 A resolution: implications for catalytic mechanism, cytokine activity and haemolytic anaemia

J Mol Biol. 2001 Jun 1;309(2):447-63. doi: 10.1006/jmbi.2001.4680.

Abstract

Phosphoglucose isomerase (PGI) is a multifunctional protein, which, inside the cell, functions as a housekeeping enzyme of glycolysis and gluconeogenesis and, outside the cell, exerts wholly unrelated cytokine properties. We have determined the structure of human PGI to a resolution of 1.6 A using X-ray crystallography. The structure is highly similar to other PGIs, especially the architecture of the active site. Fortuitous binding of a sulphate molecule from the crystallisation solution has facilitated an accurate description of the substrate phosphate-binding site. Comparison with both native and inhibitor-bound rabbit PGI structures shows that two loops move closer to the active site upon binding inhibitor. Interestingly, the human structure most closely resembles the inhibitor-bound structure, suggesting that binding of the phosphate moiety of the substrate may trigger this conformational change. We suggest a new mechanism for catalysis that uses Glu357 as the base catalyst for the isomerase reaction rather than His388 as proposed previously. The human PGI structure has also provided a detailed framework with which to map mutations associated with non-spherocytic haemolytic anaemia.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Anemia, Hemolytic / enzymology*
  • Anemia, Hemolytic / genetics
  • Animals
  • Binding Sites
  • Catalysis
  • Crystallization
  • Crystallography, X-Ray
  • Cytokines / chemistry
  • Cytokines / genetics
  • Cytokines / metabolism*
  • Enzyme Inhibitors / metabolism
  • Enzyme Inhibitors / pharmacology
  • Glucose-6-Phosphate Isomerase / antagonists & inhibitors
  • Glucose-6-Phosphate Isomerase / chemistry*
  • Glucose-6-Phosphate Isomerase / genetics
  • Glucose-6-Phosphate Isomerase / metabolism*
  • Glutamic Acid / metabolism
  • Humans
  • Isomerism
  • Ligands
  • Models, Molecular
  • Molecular Sequence Data
  • Movement / drug effects
  • Mutation, Missense / genetics
  • Phosphates / metabolism
  • Protein Structure, Secondary / drug effects
  • Rabbits
  • Structure-Activity Relationship
  • Sulfates / metabolism

Substances

  • Cytokines
  • Enzyme Inhibitors
  • Ligands
  • Phosphates
  • Sulfates
  • Glutamic Acid
  • Glucose-6-Phosphate Isomerase

Associated data

  • PDB/1IAT