Cloning and characterisation of a hyp gene cluster in the filamentous cyanobacterium Nostoc sp. strain PCC 73102

FEMS Microbiol Lett. 2001 Jul 10;201(1):59-64. doi: 10.1111/j.1574-6968.2001.tb10733.x.

Abstract

Maturation of [NiFe]-hydrogenases requires the action of several groups of accessory genes. Homologues of one group of these genes, the so-called hyp genes, putatively encoding proteins participating in the formation of an active uptake hydrogenase in the filamentous, heterocyst-forming cyanobacterium Nostoc PCC 73102, were cloned. The cluster, consisting of hypF, hypC, hypD, hypE, hypA, and hypB, is located 3.8 kb upstream from the uptake hydrogenase-encoding hupSL. Gene expression analyses show that these hyp genes are, like hupL, transcribed under N(2)-fixing but not under non-N(2)-fixing growth conditions. Furthermore, the six hyp genes are transcribed together with an open reading frame upstream of hypF, as a single mRNA. Analysis of the DNA region upstream of the experimentally determined transcriptional start site revealed putative -10 and -35 sequence elements and putative binding sites for the global nitrogen regulator NtcA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Motifs
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics
  • Base Sequence
  • Carrier Proteins / chemistry
  • Carrier Proteins / genetics
  • Cloning, Molecular*
  • Cyanobacteria / enzymology
  • Cyanobacteria / genetics*
  • GTP-Binding Proteins / chemistry
  • GTP-Binding Proteins / genetics
  • Gene Expression
  • Genes, Bacterial*
  • Hydrogenase / genetics
  • Hydrogenase / metabolism*
  • Molecular Sequence Data
  • Multigene Family
  • Nitrogen Fixation
  • Open Reading Frames
  • Proteins*
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Analysis, Protein
  • Transcription, Genetic

Substances

  • Bacterial Proteins
  • Carrier Proteins
  • HypB protein, bacteria
  • HypC protein, Bacteria
  • HypD protein, Bacteria
  • HypF protein, Bacteria
  • Proteins
  • hypE protein, Bacteria
  • Hydrogenase
  • GTP-Binding Proteins