Effect of poly(ADP-ribosyl)ation and Mg2+ ions on chromatin structure revealed by scanning force microscopy

Biochemistry. 2001 Sep 18;40(37):10947-55. doi: 10.1021/bi002742a.

Abstract

Poly(ADP-ribosyl)ation of nuclear proteins is responsible for major changes in the high-order chromatin structure. The effects of this post-translation modification on nuclear architecture were examined at different Mg2+ concentrations using scanning force microscopy. A quantitative analysis of the internucleosomal distance, the width, and the volume of chromatin fibers imaged in tapping mode reveals that poly(ADP-ribosyl)ation induces a complete relaxation and decondensation of the chromatin structure. Our data, on the center-to-center distance between adjacent nucleosomes and on the fiber width, indicate that the poly(ADP-ribosyl)ated fibers remain significantly decondensed even in the presence of Mg2+. Our results also show that the Mg2+ assumes an important role in the folding of chromatin structure, but Mg2+ is not able to restore the native feature of chromatin, when the fibers are depleted of H1/H5 histones. The combined effect of post-translation modification and cation ions on the chromatin structure shows that poly(ADP-ribosyl)ation could promote accessibility to DNA even in those nuclear processes that require Mg2+.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chromatin / ultrastructure*
  • Histones / metabolism
  • Magnesium / metabolism*
  • Microscopy, Atomic Force
  • Molecular Conformation
  • Nucleosomes / ultrastructure
  • Poly Adenosine Diphosphate Ribose / metabolism*
  • Protein Processing, Post-Translational*

Substances

  • Chromatin
  • Histones
  • Nucleosomes
  • Poly Adenosine Diphosphate Ribose
  • Magnesium